RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 CCDC105Q8IYK2 499 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 ANKRD42Q8N9B4 389 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 TCP11Q8WWU5 503 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 IRX2Q9BZI1 471 aaPredicted RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 C6orf50Q9HD87 102 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 TUBE1Q9UJT0 475 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 PACSIN2Q9UNF0 486 aaPredicted RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 BAZ2BQ9UIF8 2168 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 SOS2Q07890 1332 aaPredicted RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 SLIT1O75093 1534 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 MEGF6O75095 1541 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 PLEKHA8P1O95397 391 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 GRIN1Q05586 938 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 PDE4DQ08499 809 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 IFT88Q13099 833 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 KRT80Q6KB66 452 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC125Q86Z20 511 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 GPKOWQ92917 476 aaPredicted RBP eCLIP6.66□□□□□ -1.346e-12■□□□□ 10.8
HNRNPU-208ENST00000475997 KIFC3Q9BVG8 833 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 PALMDQ9NP74 551 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 ANKFY1Q9P2R3 1169 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 SAP30BPQ9UHR5 308 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 HYOU1Q9Y4L1 999 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 KCNJ18B7U540 433 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 C6orf229H3BNL8 230 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 SCG2P13521 617 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 IL9RQ01113 521 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 MORC3Q14149 939 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 KCNJ12Q14500 433 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 ASIC2Q16515 512 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 KLHL7Q8IXQ5 586 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 BBOF1Q8ND07 529 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 RASGRP4Q8TDF6 673 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 KIFC2Q96AC6 838 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 GDAP1L1Q96MZ0 367 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 UIMC1Q96RL1 719 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 MPHOSPH6Q99547 160 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 PARD6BQ9BYG5 372 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 TRIM31Q9BZY9 425 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 ST7Q9NRC1 585 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 FAM205CA6NFA0 338 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 SERPINI2O75830 405 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 CPDO75976 1380 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 HSPA8P11142 646 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 EPB41P11171 864 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 RPS8P62241 208 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 CUL4BQ13620 913 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 ALX1Q15699 326 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 RSBN1LQ6PCB5 846 aaPredicted RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 TPTE2Q6XPS3 522 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 PEX26Q7Z412 305 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 CTAGE3PQ8IX95 158 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 SLC35F6Q8N357 371 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 FNBP4Q8N3X1 1017 aaPredicted RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 OR8K1Q8NGG5 319 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 LRRC8CQ8TDW0 803 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 PAGE5Q96GU1 130 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 LRGUKQ96M69 825 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 WDR24Q96S15 920 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 MIS12Q9H081 205 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 HAUS4Q9H6D7 363 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 CNOT10Q9H9A5 744 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 ZCCHC17Q9NP64 241 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 IRAK4Q9NWZ3 460 aa6.66□□□□□ -1.34
HNRNPU-208ENST00000475997 ARHGAP10A1A4S6 786 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 CRKLP46109 303 aaKnown RBP6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 IRX5P78411 483 aaPredicted RBP6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 FMR1Q06787 632 aaKnown RBP eCLIP6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 MTF1Q14872 753 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 CNNM4Q6P4Q7 775 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 ACRBPQ8NEB7 543 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 ZC3H15Q8WU90 426 aaKnown RBP6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 POLE3Q9NRF9 147 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 FGFR1OP2Q9NVK5 253 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 CDC23Q9UJX2 597 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DAAM1Q9Y4D1 1078 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 ANGPTL3Q9Y5C1 460 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 UBR1Q8IWV7 1749 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 A0A1B0GW55 424 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC151A5D8V7 595 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 MYO1CO00159 1063 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DUX4L2P0CJ85 424 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DUX4L3P0CJ86 424 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DUX4L4P0CJ87 422 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DUX4L5P0CJ88 424 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DUX4L6P0CJ89 424 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DUX4L7P0CJ90 424 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 CYP19A1P11511 503 aaPredicted RBP6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 TADA2BQ86TJ2 420 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 BLIDQ8IZY5 108 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 GRK7Q8WTQ7 553 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 RIC8AQ9NPQ8 531 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 GIMAP4Q9NUV9 329 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 INTS9Q9NV88 658 aaKnown RBP6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 DUX4Q9UBX2 424 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 NUB1Q9Y5A7 615 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 ORC6Q9Y5N6 252 aa6.65□□□□□ -1.34
HNRNPU-208ENST00000475997 OVOS2A0A0G2JMS6 1433 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms