RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 TEX35Q5T0J7 233 aa22.72■■□□□ 1.23
TUBGCP3-204ENST00000464139 ZSWIM4Q9H7M6 989 aa22.72■■□□□ 1.23
TUBGCP3-204ENST00000464139 GCFC2P16383 781 aaKnown RBP22.72■■□□□ 1.23
TUBGCP3-204ENST00000464139 ANO3Q9BYT9 981 aa22.72■■□□□ 1.23
TUBGCP3-204ENST00000464139 TTYH3Q9C0H2 523 aa22.72■■□□□ 1.23
TUBGCP3-204ENST00000464139 SSBP05455 408 aaKnown RBP eCLIP22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 TAL1P17542 331 aaPredicted RBP22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 TSR1Q2NL82 804 aaKnown RBP22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 TMEM179Q6ZVK1 233 aa22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 PRMT6Q96LA8 375 aaPredicted RBP22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 P2RX7Q99572 595 aaKnown RBP22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 IKQ13123 557 aaPredicted RBP22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 KIF4BQ2VIQ3 1234 aa22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 TRIM10Q9UDY6 481 aa22.71■■□□□ 1.23
TUBGCP3-204ENST00000464139 MEIS2O14770 477 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 ERCC3P19447 782 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 USH1GQ495M9 461 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 GUF1Q8N442 669 aaKnown RBP22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 TFR2Q9UP52 801 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 ZNF646O15015 1829 aaPredicted RBP22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 E9PMD0 336 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 NDUFB10O96000 172 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 RRP1BQ14684 758 aaKnown RBP22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 RSRC2Q7L4I2 434 aaKnown RBP22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 DNAJC19Q96DA6 116 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 KIAA1024Q9UPX6 916 aa22.7■■□□□ 1.22
TUBGCP3-204ENST00000464139 GH2P01242 217 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 STAT3P40763 770 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 EHHADHQ08426 723 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 C7orf43Q8WVR3 580 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 CNKSR1Q969H4 720 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 CTAGE9A4FU28 777 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 TFRCP02786 760 aaKnown RBP22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 SMAP1Q8IYB5 467 aaPredicted RBP22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 NUP58Q9BVL2 599 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 LRRC27Q9C0I9 530 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 GLT8D2Q9H1C3 349 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 PUF60Q9UHX1 559 aaKnown RBP22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 GUCA1BQ9UMX6 200 aa22.69■■□□□ 1.22
TUBGCP3-204ENST00000464139 YDJCA8MPS7 323 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 FKBP15Q5T1M5 1219 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 TBC1D7Q9P0N9 293 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 CDC23Q9UJX2 597 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 POTEB3A0JP26 581 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 POTECB2RU33 542 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 NPM3O75607 178 aaKnown RBP22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 USP11P51784 963 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 COASYQ13057 564 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 POTEBQ6S5H4 581 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 ERGIC2Q96RQ1 377 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 AMNQ9BXJ7 453 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 KCNMB3Q9NPA1 279 aa22.68■■□□□ 1.22
TUBGCP3-204ENST00000464139 HERVK_113P62684 666 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 CACNB1Q02641 598 aaPredicted RBP22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 MEA1Q16626 185 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 SPICE1Q8N0Z3 855 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 RETREG2Q8NC44 543 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 CSRNP1Q96S65 589 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 NAP1L4Q99733 375 aaKnown RBP22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 NPHP3-ACAD11A0A0J9YXS1 232 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 ZBED6P86452 979 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 VWA3BQ502W6 1294 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 GMCL1P1Q8NEA9 526 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 FGFBP2Q9BYJ0 223 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 PANK4Q9NVE7 773 aa22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 ARGLU1Q9NWB6 273 aaPredicted RBP22.67■■□□□ 1.22
TUBGCP3-204ENST00000464139 A0A1W2PRG0 241 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 PPIP5K2O43314 1243 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 ARHGAP4P98171 946 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 RAD51AP2Q09MP3 1159 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 PSMD2Q13200 908 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 PRR16Q569H4 304 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 HYIQ5T013 277 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 RBM26Q5T8P6 1007 aaKnown RBP22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 FBXO11Q86XK2 927 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 GOLGA1Q92805 767 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 NAPGQ99747 312 aaPredicted RBP22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 NT5C3AQ9H0P0 336 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 NDST4Q9H3R1 872 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 C21orf2O43822 256 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 ZSCAN20P17040 1043 aaPredicted RBP22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 LRRC63Q05C16 580 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 SYDE2Q5VT97 1194 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 LRRC55Q6ZSA7 311 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 SRGAP1Q7Z6B7 1085 aa22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 GPR161Q8N6U8 529 aaKnown RBP22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 ZNHIT6Q9NWK9 470 aaKnown RBP22.66■■□□□ 1.22
TUBGCP3-204ENST00000464139 KDM3AQ9Y4C1 1321 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 CYP3A7-CYP3A51PA0A087WV96 503 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 SEC31AO94979 1220 aaKnown RBP22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 PLA2G4BP0C869 781 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 CYP3A7P24462 503 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 RXRBP28702 533 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 CHMP4BP1P59074 171 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 MYOCDQ8IZQ8 938 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 GMCL1Q96IK5 515 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 NHEJ1Q9H9Q4 299 aaPredicted RBP22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 FAM53CQ9NYF3 392 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 TCP10L2B9ZVM9 353 aa22.65■■□□□ 1.22
TUBGCP3-204ENST00000464139 EPHB6O15197 1021 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms