RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CERS5Q8N5B7 392 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 CUL5Q93034 780 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 GBP3Q9H0R5 595 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 USP17L10C9JJH3 530 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 FGFR1OPO95684 399 aaKnown RBP18.82■□□□□ 0.6
ACTB-207ENST00000462494 MAN2A1Q16706 1144 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 PAPD7Q5XG87 772 aaKnown RBP18.82■□□□□ 0.6
ACTB-207ENST00000462494 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 CAGE1Q8TC20 777 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 ZC3H12CQ9C0D7 883 aaKnown RBP18.82■□□□□ 0.6
ACTB-207ENST00000462494 COA1Q9GZY4 146 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 JADE2Q9NQC1 790 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 MEX3CQ5U5Q3 659 aaKnown RBP18.82■□□□□ 0.6
ACTB-207ENST00000462494 NEK11Q8NG66 645 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 SECISBP2LQ93073 1101 aaKnown RBP18.82■□□□□ 0.6
ACTB-207ENST00000462494 TANGO6Q9C0B7 1094 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 DEF6Q9H4E7 631 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 SIK3Q9Y2K2 1263 aa18.82■□□□□ 0.6
ACTB-207ENST00000462494 POLRMTO00411 1230 aaKnown RBP18.81■□□□□ 0.6
ACTB-207ENST00000462494 ZNF263O14978 683 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 ZNF185O15231 689 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 EIF3JO75822 258 aaKnown RBP18.81■□□□□ 0.6
ACTB-207ENST00000462494 SHMT1P34896 483 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 VAV2P52735 878 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 MRPL12P52815 198 aaKnown RBP18.81■□□□□ 0.6
ACTB-207ENST00000462494 PPP4R3AQ6IN85 833 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 SP8Q8IXZ3 490 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
ACTB-207ENST00000462494 HAS1Q92839 578 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 TSG101Q99816 390 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 LRRC27Q9C0I9 530 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 PSTPIP2Q9H939 334 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 SWAP70Q9UH65 585 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 CDK17Q00537 523 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 LRRC63Q05C16 580 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 CASP8Q14790 479 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 TMEM119Q4V9L6 283 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 PPP1R18Q6NYC8 613 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 RRAGAQ7L523 313 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 SEPT12Q8IYM1 358 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 TBC1D7Q9P0N9 293 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 ARHGAP20Q9P2F6 1191 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 PCDHA12Q9UN75 941 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
ACTB-207ENST00000462494 FOCADQ5VW36 1801 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 ZBTB5O15062 677 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 TUBBP07437 444 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 IFIH1Q9BYX4 1025 aaKnown RBP18.8■□□□□ 0.6
ACTB-207ENST00000462494 TSGA10Q9BZW7 698 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 G3V3G9 751 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 USO1O60763 962 aaKnown RBP18.8■□□□□ 0.6
ACTB-207ENST00000462494 N4BP1O75113 896 aaKnown RBP18.8■□□□□ 0.6
ACTB-207ENST00000462494 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 EIF4A3P38919 411 aaKnown RBP18.8■□□□□ 0.6
ACTB-207ENST00000462494 CLK2P49760 499 aaKnown RBP18.8■□□□□ 0.6
ACTB-207ENST00000462494 USP14P54578 494 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 CKAP4Q07065 602 aaKnown RBP18.8■□□□□ 0.6
ACTB-207ENST00000462494 DCAF8Q5TAQ9 597 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 CDC42EP5Q6NZY7 148 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 CCDC84Q86UT8 332 aaPredicted RBP18.8■□□□□ 0.6
ACTB-207ENST00000462494 CCDC155Q8N6L0 562 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 IQCDQ96DY2 449 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 DRC1Q96MC2 740 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 VPS18Q9P253 973 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 PCDHA13Q9Y5I0 950 aa18.8■□□□□ 0.6
ACTB-207ENST00000462494 LRRC53A6NM62 1247 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 KIF11P52732 1056 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 COASYQ13057 564 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 PSMD2Q13200 908 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 GPATCH4Q5T3I0 446 aaKnown RBP18.79■□□□□ 0.6
ACTB-207ENST00000462494 WDR93Q6P2C0 686 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 LRRC55Q6ZSA7 311 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 MYOCDQ8IZQ8 938 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 PANK4Q9NVE7 773 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 ADAM21Q9UKJ8 722 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 ATP6V0A2Q9Y487 856 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 UBR3Q6ZT12 1888 aa18.79■□□□□ 0.6
ACTB-207ENST00000462494 USP17L15C9J2P7 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L13C9JLJ4 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L11C9JVI0 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L18D6R9N7 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L22D6RA61 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L17D6RBQ6 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L19D6RCP7 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L20D6RJB6 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 AKR1B10O60218 316 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L24Q0WX57 530 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 NFIAQ12857 509 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 USP17L6PQ6QN14 398 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 CACNA2D4Q7Z3S7 1137 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 CCDC102AQ96A19 550 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 PURBQ96QR8 312 aaKnown RBP18.78■□□□□ 0.6
ACTB-207ENST00000462494 SUGT1Q9Y2Z0 365 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 TRAF5O00463 557 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 TAF3Q5VWG9 929 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 DNAJC19Q96DA6 116 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 BMP2KQ9NSY1 1161 aaPredicted RBP18.78■□□□□ 0.6
ACTB-207ENST00000462494 KIAA1024Q9UPX6 916 aa18.78■□□□□ 0.6
ACTB-207ENST00000462494 ANO9A1A5B4 782 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms