RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 JRKLQ9Y4A0 524 aa21.71■■□□□ 1.07
CNEP1R1-203ENST00000458059 BAG3O95817 575 aa21.7■■□□□ 1.06
CNEP1R1-203ENST00000458059 ATP1A2P50993 1020 aa21.7■■□□□ 1.06
CNEP1R1-203ENST00000458059 ERGIC2Q96RQ1 377 aa21.7■■□□□ 1.06
CNEP1R1-203ENST00000458059 SIK3Q9Y2K2 1263 aa21.7■■□□□ 1.06
CNEP1R1-203ENST00000458059 SPTY2D1Q68D10 685 aaPredicted RBP21.7■■□□□ 1.06
CNEP1R1-203ENST00000458059 DDX12PQ92771 950 aa21.7■■□□□ 1.06
CNEP1R1-203ENST00000458059 GOLPH3Q9H4A6 298 aa21.7■■□□□ 1.06
CNEP1R1-203ENST00000458059 TRAF5O00463 557 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 GNA11P29992 359 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 GUCY2FP51841 1108 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 RETREG2Q8NC44 543 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 ARL8AQ96BM9 186 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 SAMM50Q9Y512 469 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 NPHP3-ACAD11A0A0J9YXS1 232 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 MCM3P25205 808 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 AARSP49588 968 aaKnown RBP eCLIP21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 ECM1Q16610 540 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 CCDC40Q4G0X9 1142 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 SLC16A2P36021 539 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 PRPHP41219 470 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 TRADDQ15628 312 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 FAM184BQ9ULE4 1060 aa21.69■■□□□ 1.06
CNEP1R1-203ENST00000458059 CASZ1Q86V15 1759 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 DLEC1Q9Y238 1755 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 ANO9A1A5B4 782 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 TARSL2A2RTX5 802 aaKnown RBP21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 CENPPQ6IPU0 288 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 TPTE2Q6XPS3 522 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 DAGLBQ8NCG7 672 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 AK8Q96MA6 479 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 ALS2CR12Q96Q35 445 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 PURBQ96QR8 312 aaKnown RBP21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 VIPAS39Q9H9C1 493 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 SCN7AQ01118 1682 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 LAD1O00515 517 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 MYL1P05976 194 aa21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 ZSCAN29Q8IWY8 852 aaPredicted RBP21.68■■□□□ 1.06
CNEP1R1-203ENST00000458059 KRT14P02533 472 aa21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 POLR2FP61218 127 aaKnown RBP21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 MAN2A1Q16706 1144 aa21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 C8orf74Q6P047 294 aa21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 IQCEQ6IPM2 695 aa21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 CERS3Q8IU89 383 aa21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 AENQ8WTP8 325 aaKnown RBP21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 RPGRIP1Q96KN7 1286 aa21.67■■□□□ 1.06
CNEP1R1-203ENST00000458059 GNGT1P63211 74 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 RUFY1Q96T51 708 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 PACSIN1Q9BY11 444 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 TSGA10Q9BZW7 698 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 TSPYL1Q9H0U9 437 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 NFU1Q9UMS0 254 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 HYOU1Q9Y4L1 999 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 RAPGEF1Q13905 1077 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 HAUS3Q68CZ6 603 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 PACS2Q86VP3 889 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 TLR10Q9BXR5 811 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 CUEDC2Q9H467 287 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 FAM153BP0C7A2 387 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 PAFAH1B1P43034 410 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 FAM153CQ494X1 144 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 GALNT17Q6IS24 598 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 WDR66Q8TBY9 1149 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 LSM14BQ9BX40 385 aaKnown RBP21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 FAM153AQ9UHL3 310 aa21.66■■□□□ 1.06
CNEP1R1-203ENST00000458059 ZEB2O60315 1214 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 PPFIA4O75335 1185 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 TM4SF1P30408 202 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 CARSP49589 748 aaKnown RBP21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 TTBK2Q6IQ55 1244 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 UNC13DQ70J99 1090 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 FNBP4Q8N3X1 1017 aaPredicted RBP21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 CENPHQ9H3R5 247 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 KIAA1551Q9HCM1 1747 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 MYH1P12882 1939 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 GLI1P08151 1106 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 GUCY2DQ02846 1103 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 EHHADHQ08426 723 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 KCNMA1Q12791 1236 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 PDCLQ13371 301 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 TMEM266Q2M3C6 531 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 KRT79Q5XKE5 535 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 MSL3Q8N5Y2 521 aaKnown RBP21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 BCAS4Q8TDM0 211 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 BAP1Q92560 729 aa21.65■■□□□ 1.06
CNEP1R1-203ENST00000458059 E9PMD0 336 aa21.64■■□□□ 1.06
CNEP1R1-203ENST00000458059 PALMO75781 387 aa21.64■■□□□ 1.06
CNEP1R1-203ENST00000458059 IRAK1P51617 712 aa21.64■■□□□ 1.06
CNEP1R1-203ENST00000458059 TBC1D5Q92609 795 aa21.64■■□□□ 1.06
CNEP1R1-203ENST00000458059 SPZ1Q9BXG8 430 aa21.64■■□□□ 1.06
CNEP1R1-203ENST00000458059 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.06
CNEP1R1-203ENST00000458059 STIM2Q9P246 746 aa21.64■■□□□ 1.06
CNEP1R1-203ENST00000458059 LIG3P49916 1009 aa21.64■■□□□ 1.05
CNEP1R1-203ENST00000458059 KLHL7Q8IXQ5 586 aa21.64■■□□□ 1.05
CNEP1R1-203ENST00000458059 ANKS1AQ92625 1134 aa21.64■■□□□ 1.05
CNEP1R1-203ENST00000458059 EPB41L5Q9HCM4 733 aa21.64■■□□□ 1.05
CNEP1R1-203ENST00000458059 ADAMTS1Q9UHI8 967 aa21.64■■□□□ 1.05
CNEP1R1-203ENST00000458059 UFL1O94874 794 aa21.63■■□□□ 1.05
CNEP1R1-203ENST00000458059 SLC10A5Q5PT55 438 aa21.63■■□□□ 1.05
CNEP1R1-203ENST00000458059 KLHDC7AQ5VTJ3 777 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms