RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 CTDNEP1O95476 244 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 CALML3P27482 149 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 GNA11P29992 359 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 ANP32AP39687 249 aaKnown RBP10.53□□□□□ -0.72
RFX3-207ENST00000449190 ADCY7P51828 1080 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 LRRC41Q15345 812 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 PKN1Q16512 942 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 GJC2Q5T442 439 aaPredicted RBP10.53□□□□□ -0.72
RFX3-207ENST00000449190 WWC2Q6AWC2 1192 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 MCTP2Q6DN12 878 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 SMARCC2Q8TAQ2 1214 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 MORC4Q8TE76 937 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 MPHOSPH6Q99547 160 aaKnown RBP10.53□□□□□ -0.72
RFX3-207ENST00000449190 ALG1Q9BT22 464 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 KRTAP3-2Q9BYR7 98 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 SENP6Q9GZR1 1112 aaPredicted RBP10.53□□□□□ -0.72
RFX3-207ENST00000449190 EHMT1Q9H9B1 1298 aa10.53□□□□□ -0.72
RFX3-207ENST00000449190 COL11A1P12107 1806 aaPredicted RBP10.53□□□□□ -0.72
RFX3-207ENST00000449190 KBTBD13C9JR72 458 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 H0YGN5 161 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 NFIBO00712 420 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 DUSP11O75319 330 aaKnown RBP10.52□□□□□ -0.73
RFX3-207ENST00000449190 CUL4AQ13619 759 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 SAFBQ15424 915 aaKnown RBP eCLIP10.52□□□□□ -0.73
RFX3-207ENST00000449190 ANO1Q5XXA6 986 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 IQSEC1Q6DN90 963 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 GALNT17Q6IS24 598 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 RNF180Q86T96 592 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 DNERQ8NFT8 737 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 INTS4Q96HW7 963 aaKnown RBP10.52□□□□□ -0.73
RFX3-207ENST00000449190 TSEN34Q9BSV6 310 aaKnown RBP10.52□□□□□ -0.73
RFX3-207ENST00000449190 BRMS1Q9HCU9 246 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 XPNPEP3Q9NQH7 507 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 VPS54Q9P1Q0 977 aa10.52□□□□□ -0.73
RFX3-207ENST00000449190 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.73
RFX3-207ENST00000449190 FOSP01100 380 aaPredicted RBP10.51□□□□□ -0.73
RFX3-207ENST00000449190 GJB2P29033 226 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 EMP3P54852 163 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 RPS6P62753 249 aaKnown RBP10.51□□□□□ -0.73
RFX3-207ENST00000449190 CCDC144BQ3MJ40 725 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 C8orf76Q96K31 380 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 KATNBL1Q9H079 304 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 SPC25Q9HBM1 224 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 RIC8AQ9NPQ8 531 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 PHF24Q9UPV7 400 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 PDE4DIPQ5VU43 2346 aa10.51□□□□□ -0.73
RFX3-207ENST00000449190 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 SPDYE3A6NKU9 549 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 H3BQV1 296 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 DTNBO60941 627 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 PGK1P00558 417 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 FDPSP14324 419 aaKnown RBP10.5□□□□□ -0.73
RFX3-207ENST00000449190 PDCP20941 246 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 HOXA13P31271 388 aaPredicted RBP10.5□□□□□ -0.73
RFX3-207ENST00000449190 ALDH5A1P51649 535 aaPredicted RBP10.5□□□□□ -0.73
RFX3-207ENST00000449190 HSD17B4P51659 736 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 FOSBP53539 338 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 GJA9P57773 515 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 NKX3-2P78367 333 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 TNFAIP2Q03169 654 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 ST3GAL1Q11201 340 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 GNL2Q13823 731 aaKnown RBP10.5□□□□□ -0.73
RFX3-207ENST00000449190 ARHGEF16Q5VV41 709 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 TAPT1Q6NXT6 567 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 SLC39A5Q6ZMH5 540 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 KLHDC9Q8NEP7 349 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 SYTL5Q8TDW5 730 aaPredicted RBP10.5□□□□□ -0.73
RFX3-207ENST00000449190 NSUN6Q8TEA1 469 aaKnown RBP10.5□□□□□ -0.73
RFX3-207ENST00000449190 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 PURBQ96QR8 312 aaKnown RBP10.5□□□□□ -0.73
RFX3-207ENST00000449190 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 VTA1Q9NP79 307 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 PCDHA4Q9UN74 947 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 Q9Y3F1 56 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 ASTN1O14525 1302 aa10.5□□□□□ -0.73
RFX3-207ENST00000449190 RBM47A0AV96 593 aaKnown RBP10.49□□□□□ -0.73
RFX3-207ENST00000449190 PIK3CDO00329 1044 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 ADAMTS4O75173 837 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 CST5P28325 142 aaPredicted RBP10.49□□□□□ -0.73
RFX3-207ENST00000449190 ADCYAP1R1P41586 468 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 LRRC26Q2I0M4 334 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 C1orf53Q5VUE5 145 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 LARP1BQ659C4 914 aaKnown RBP10.49□□□□□ -0.73
RFX3-207ENST00000449190 CCSAPQ6IQ19 270 aaPredicted RBP10.49□□□□□ -0.73
RFX3-207ENST00000449190 USP17L6PQ6QN14 398 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 SLC30A10Q6XR72 485 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 BLIDQ8IZY5 108 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 REXO1Q8N1G1 1221 aaKnown RBP10.49□□□□□ -0.73
RFX3-207ENST00000449190 PCSK9Q8NBP7 692 aaKnown RBP10.49□□□□□ -0.73
RFX3-207ENST00000449190 AIFM3Q96NN9 605 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 TAAR1Q96RJ0 339 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 IWS1Q96ST2 819 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 RMDN3Q96TC7 470 aa10.49□□□□□ -0.73
RFX3-207ENST00000449190 UPF3AQ9H1J1 476 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms