RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 COPB1P53618 953 aaKnown RBP19.53■□□□□ 0.72
SMC6-206ENST00000446852 SPIRE1Q08AE8 756 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 Q4G0T1 1027 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 FILIP1LQ4L180 1135 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 MYRIPQ8NFW9 859 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 TBC1D5Q92609 795 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 DHTKD1Q96HY7 919 aaPredicted RBP19.53■□□□□ 0.72
SMC6-206ENST00000446852 VPS16Q9H269 839 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 SLFN12Q8IYM2 578 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 PPP1R13BQ96KQ4 1090 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 TRIM47Q96LD4 638 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 DUSP9Q99956 384 aaKnown RBP19.53■□□□□ 0.72
SMC6-206ENST00000446852 ZNF341Q9BYN7 854 aa19.53■□□□□ 0.72
SMC6-206ENST00000446852 PLA2G6O60733 806 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 TNFAIP1Q13829 316 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 TBC1D10BQ4KMP7 808 aaPredicted RBP19.52■□□□□ 0.72
SMC6-206ENST00000446852 CEP135Q66GS9 1140 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 CNNM4Q6P4Q7 775 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 UNC13DQ70J99 1090 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 GJA3Q9Y6H8 435 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 PSDA5PKW4 1024 aaPredicted RBP19.52■□□□□ 0.72
SMC6-206ENST00000446852 FZD9O00144 591 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 N4BP3O15049 544 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.72
SMC6-206ENST00000446852 FCHSD1Q86WN1 690 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 CYP2W1Q8TAV3 490 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 DDX12PQ92771 950 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 P2RX5Q93086 422 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 SLC39A2Q9NP94 309 aa19.52■□□□□ 0.72
SMC6-206ENST00000446852 KDM3AQ9Y4C1 1321 aa19.52■□□□□ 0.71
SMC6-206ENST00000446852 PVALEFA0A1B0GWK0 134 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 POTEB3A0JP26 581 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 POTECB2RU33 542 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 CFBP00751 764 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 CCNE1P24864 410 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 CIITAP33076 1130 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 PTGER2P43116 358 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 PTPN14Q15678 1187 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 COBLL1Q53SF7 1204 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 POTEBQ6S5H4 581 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 FAM160B2Q86V87 743 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 CREBRFQ8IUR6 639 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 SRRTQ9BXP5 876 aaKnown RBP19.51■□□□□ 0.71
SMC6-206ENST00000446852 CNOT7Q9UIV1 285 aaKnown RBP19.51■□□□□ 0.71
SMC6-206ENST00000446852 RBBP6Q7Z6E9 1792 aaKnown RBP19.51■□□□□ 0.71
SMC6-206ENST00000446852 TBX3O15119 743 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 RBL2Q08999 1139 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 ANKRD40Q6AI12 368 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 FEZ1Q99689 392 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 BAG1Q99933 345 aaPredicted RBP19.51■□□□□ 0.71
SMC6-206ENST00000446852 NT5C3AQ9H0P0 336 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 THAP9Q9H5L6 903 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 FEM1BQ9UK73 627 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 KIAA1024Q9UPX6 916 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 DOCK1Q14185 1865 aa19.51■□□□□ 0.71
SMC6-206ENST00000446852 E9PMD0 336 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 MED24O75448 989 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 CYP3A4P08684 503 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 INPP5BP32019 993 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 TRAF1Q13077 416 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 ANKRD20A12PQ8NF67 263 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 NLGN2Q8NFZ4 835 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 ITIH6Q6UXX5 1313 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 RIOK3O14730 519 aaKnown RBP19.5■□□□□ 0.71
SMC6-206ENST00000446852 MSH4O15457 936 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 EHHADHQ08426 723 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 DNAJC19Q96DA6 116 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 EEF2KMTQ96G04 330 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 GTPBP4Q9BZE4 634 aaKnown RBP19.5■□□□□ 0.71
SMC6-206ENST00000446852 ZNF541Q9H0D2 1346 aa19.5■□□□□ 0.71
SMC6-206ENST00000446852 AKR1B15C9JRZ8 316 aaPredicted RBP19.49■□□□□ 0.71
SMC6-206ENST00000446852 ARHGAP6O43182 974 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 GYPCP04921 128 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 IDEP14735 1019 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 EEF1GP26641 437 aaKnown RBP19.49■□□□□ 0.71
SMC6-206ENST00000446852 DGKZQ13574 1117 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 CSGALNACT2Q8N6G5 542 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 PARP14Q460N5 1801 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 IGLV3-22A0A075B6J6 115 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 STX10O60499 249 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 LDHDQ86WU2 507 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 SEMA6BQ9H3T3 888 aa19.49■□□□□ 0.71
SMC6-206ENST00000446852 BICDL2A1A5D9 508 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 GCOM1H8Y6P7 765 aaPredicted RBP19.48■□□□□ 0.71
SMC6-206ENST00000446852 POLR2MP0CAP2 368 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 PPP1R2P41236 205 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 PPFIBP1Q86W92 1011 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 CPLX3Q8WVH0 158 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 FAM20AQ96MK3 541 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 LRRC27Q9C0I9 530 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 DEFB129Q9H1M3 183 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 POTEFA5A3E0 1075 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 POTEIP0CG38 1075 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 CASP14P31944 242 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 KIF4BQ2VIQ3 1234 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 NCAPH2Q6IBW4 605 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 POTEGQ6S5H5 508 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 POTEEQ6S8J3 1075 aa19.48■□□□□ 0.71
SMC6-206ENST00000446852 TEX2Q8IWB9 1127 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms