RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 SHROOM1Q2M3G4 852 aaPredicted RBP18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 KRT79Q5XKE5 535 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 UNC13DQ70J99 1090 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 HAS1Q92839 578 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 GLT8D2Q9H1C3 349 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 LZTFL1Q9NQ48 299 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 TADA3O75528 432 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 SLC1A4P43007 532 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 SNX29Q8TEQ0 813 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 RAD54LQ92698 747 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 TUBGCP2Q9BSJ2 902 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 CARD6Q9BX69 1037 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 MRFAP1Q9Y605 127 aa18.11■□□□□ 0.49
PIKFYVE-206ENST00000443896 QRICH1Q2TAL8 776 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 FAM114A1Q8IWE2 563 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 BANK1Q8NDB2 785 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 MYCBPQ99417 103 aaPredicted RBP18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 NUDT12Q9BQG2 462 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 A0A0U1RQJ8 604 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 TTC26A0AVF1 554 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 SLFN13Q68D06 897 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 ZNF772Q68DY9 489 aaPredicted RBP18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 SIAH1Q8IUQ4 282 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 ATRIPQ8WXE1 791 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 NAP1L4Q99733 375 aaKnown RBP18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 IRX2Q9BZI1 471 aaPredicted RBP18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 MYH7BA7E2Y1 1941 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 EFCAB8A8MWE9 144 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 TTC31Q49AM3 519 aaPredicted RBP18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 DNAJC7Q99615 494 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 CAPN11Q9UMQ6 739 aa18.1■□□□□ 0.49
PIKFYVE-206ENST00000443896 B4DLN1 442 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 CENPPQ6IPU0 288 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 TMEM179Q6ZVK1 233 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 ZSCAN29Q8IWY8 852 aaPredicted RBP18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 HPS3Q969F9 1004 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 CNOT6LQ96LI5 555 aaKnown RBP18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 PHACTR2O75167 634 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 SEPT2Q15019 361 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 ACRBPQ8NEB7 543 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 OR8K1Q8NGG5 319 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 C7orf43Q8WVR3 580 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 CNKSR1Q969H4 720 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 LRRC27Q9C0I9 530 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 SEMA6BQ9H3T3 888 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 SLC39A2Q9NP94 309 aa18.09■□□□□ 0.49
PIKFYVE-206ENST00000443896 KIF5CO60282 957 aa18.08■□□□□ 0.49
PIKFYVE-206ENST00000443896 HOXA7P31268 230 aaPredicted RBP18.08■□□□□ 0.49
PIKFYVE-206ENST00000443896 ARGLU1Q9NWB6 273 aaPredicted RBP18.08■□□□□ 0.49
PIKFYVE-206ENST00000443896 LUC7L2Q9Y383 392 aaKnown RBP18.08■□□□□ 0.49
PIKFYVE-206ENST00000443896 PCDHA1Q9Y5I3 950 aa18.08■□□□□ 0.49
PIKFYVE-206ENST00000443896 PES1O00541 588 aaKnown RBP18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 ICA1Q05084 483 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 CDC37Q16543 378 aaPredicted RBP18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 KCNK18Q7Z418 384 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 GOLGA6L1Q8N7Z2 621 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 CWC15Q9P013 229 aaKnown RBP18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 ATRNL1Q5VV63 1379 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 CHRNA5P30532 468 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 AOC3Q16853 763 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 TTYH3Q9C0H2 523 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 ADAM21Q9UKJ8 722 aa18.08■□□□□ 0.48
PIKFYVE-206ENST00000443896 ARFGEF1Q9Y6D6 1849 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L15C9J2P7 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L13C9JLJ4 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L11C9JVI0 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L18D6R9N7 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L22D6RA61 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L17D6RBQ6 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L19D6RCP7 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L20D6RJB6 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 BRD2P25440 801 aaKnown RBP18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 EHHADHQ08426 723 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L24Q0WX57 530 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 ECM1Q16610 540 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 MIIPQ5JXC2 388 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 HYIQ5T013 277 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP17L6PQ6QN14 398 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 CNPY4Q8N129 248 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 GMCL1P1Q8NEA9 526 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 PCDHA12Q9UN75 941 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 RAD21O60216 631 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 USP11P51784 963 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 DYMQ7RTS9 669 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 GUF1Q8N442 669 aaKnown RBP18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 NCAPGQ9BPX3 1015 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 TNS1Q9HBL0 1735 aaKnown RBP18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 VPS18Q9P253 973 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 RGPD3A6NKT7 1758 aaPredicted RBP18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 RGPD4Q7Z3J3 1758 aa18.07■□□□□ 0.48
PIKFYVE-206ENST00000443896 RETREG2Q8NC44 543 aa18.06■□□□□ 0.48
PIKFYVE-206ENST00000443896 DDX12PQ92771 950 aa18.06■□□□□ 0.48
PIKFYVE-206ENST00000443896 EEF2KMTQ96G04 330 aa18.06■□□□□ 0.48
PIKFYVE-206ENST00000443896 CHP1Q99653 195 aa18.06■□□□□ 0.48
PIKFYVE-206ENST00000443896 NUP58Q9BVL2 599 aa18.06■□□□□ 0.48
PIKFYVE-206ENST00000443896 YY1AP1Q9H869 796 aa18.06■□□□□ 0.48
PIKFYVE-206ENST00000443896 CYP3A7-CYP3A51PA0A087WV96 503 aa18.06■□□□□ 0.48
PIKFYVE-206ENST00000443896 ENTPD3O75355 529 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms