RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 IWS1Q96ST2 819 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 ADD3Q9UEY8 706 aaKnown RBP23.92■■□□□ 1.42
VPS13B-204ENST00000441350 FBXO2Q9UK22 296 aaPredicted RBP23.92■■□□□ 1.42
VPS13B-204ENST00000441350 IVNS1ABPQ9Y6Y0 642 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 GADD45BO75293 160 aaPredicted RBP23.92■■□□□ 1.42
VPS13B-204ENST00000441350 NR3C2P08235 984 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 ZNF76P36508 570 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 GRB14Q14449 540 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 CEP55Q53EZ4 464 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 AXDND1Q5T1B0 1012 aaPredicted RBP23.92■■□□□ 1.42
VPS13B-204ENST00000441350 CYP2W1Q8TAV3 490 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 RNF186Q9NXI6 227 aa23.92■■□□□ 1.42
VPS13B-204ENST00000441350 ZNF236Q9UL36 1845 aa23.91■■□□□ 1.42
VPS13B-204ENST00000441350 ADORA2AP29274 412 aa23.91■■□□□ 1.42
VPS13B-204ENST00000441350 PRPHP41219 470 aa23.91■■□□□ 1.42
VPS13B-204ENST00000441350 ALDH5A1P51649 535 aaPredicted RBP23.91■■□□□ 1.42
VPS13B-204ENST00000441350 PRR16Q569H4 304 aa23.91■■□□□ 1.42
VPS13B-204ENST00000441350 KRI1Q8N9T8 703 aaKnown RBP23.91■■□□□ 1.42
VPS13B-204ENST00000441350 FERMT2Q96AC1 680 aa23.91■■□□□ 1.42
VPS13B-204ENST00000441350 SRPRBQ9Y5M8 271 aaKnown RBP23.91■■□□□ 1.42
VPS13B-204ENST00000441350 UBIAD1Q9Y5Z9 338 aa23.91■■□□□ 1.42
VPS13B-204ENST00000441350 MEIS1O00470 390 aa23.9■■□□□ 1.42
VPS13B-204ENST00000441350 OR52Z1P0C646 297 aa23.9■■□□□ 1.42
VPS13B-204ENST00000441350 CCND2P30279 289 aa23.9■■□□□ 1.42
VPS13B-204ENST00000441350 ADALQ6DHV7 355 aa23.9■■□□□ 1.42
VPS13B-204ENST00000441350 NIPA1Q7RTP0 329 aa23.9■■□□□ 1.42
VPS13B-204ENST00000441350 MXRA8Q9BRK3 442 aa23.9■■□□□ 1.42
VPS13B-204ENST00000441350 KCNMB3Q9NPA1 279 aa23.9■■□□□ 1.42
VPS13B-204ENST00000441350 SLC15A5A6NIM6 579 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 CUTAO60888 179 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 COBLO75128 1261 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 TBC1D8O95759 1140 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 MYCLP12524 364 aaPredicted RBP23.89■■□□□ 1.42
VPS13B-204ENST00000441350 ITGB5P18084 799 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 EDNRBP24530 442 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 UBE2HP62256 183 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 IL17AQ16552 155 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 CALCRLQ16602 461 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 ZNF792Q3KQV3 632 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 HAS1Q92839 578 aa23.89■■□□□ 1.42
VPS13B-204ENST00000441350 PLXNA1Q9UIW2 1896 aa23.89■■□□□ 1.41
VPS13B-204ENST00000441350 LOC102724159A0A0B4J2E5 919 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 TRPA1O75762 1119 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 PTMSP20962 102 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 PWP2Q15269 919 aaKnown RBP23.88■■□□□ 1.41
VPS13B-204ENST00000441350 MORN1Q5T089 497 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 ETNPPLQ8TBG4 499 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 ZFP91Q96JP5 570 aaPredicted RBP23.88■■□□□ 1.41
VPS13B-204ENST00000441350 DOCK3Q8IZD9 2030 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 TBX3O15119 743 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 GRIN1Q05586 938 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 PLA2G4DQ86XP0 818 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 CLIC6Q96NY7 704 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 JADE2Q9NQC1 790 aa23.88■■□□□ 1.41
VPS13B-204ENST00000441350 MGAMO43451 1857 aa23.87■■□□□ 1.41
VPS13B-204ENST00000441350 A0A1W2PQ27 194 aa23.87■■□□□ 1.41
VPS13B-204ENST00000441350 A0A1W2PQ64 194 aa23.87■■□□□ 1.41
VPS13B-204ENST00000441350 A0A1W2PQD8 194 aa23.87■■□□□ 1.41
VPS13B-204ENST00000441350 STAM2O75886 525 aa23.87■■□□□ 1.41
VPS13B-204ENST00000441350 SETQ01105 290 aaPredicted RBP23.87■■□□□ 1.41
VPS13B-204ENST00000441350 ZNF579Q8NAF0 562 aaKnown RBP23.87■■□□□ 1.41
VPS13B-204ENST00000441350 MORC4Q8TE76 937 aa23.87■■□□□ 1.41
VPS13B-204ENST00000441350 DDX49Q9Y6V7 483 aaKnown RBP23.87■■□□□ 1.41
VPS13B-204ENST00000441350 GOLGA6L4A6NEF3 574 aa23.86■■□□□ 1.41
VPS13B-204ENST00000441350 B4DLN1 442 aa23.86■■□□□ 1.41
VPS13B-204ENST00000441350 MSH4O15457 936 aa23.86■■□□□ 1.41
VPS13B-204ENST00000441350 CTGFP29279 349 aa23.86■■□□□ 1.41
VPS13B-204ENST00000441350 DTHD1Q6ZMT9 781 aa23.86■■□□□ 1.41
VPS13B-204ENST00000441350 FAM20AQ96MK3 541 aa23.86■■□□□ 1.41
VPS13B-204ENST00000441350 INPP4AQ96PE3 977 aaPredicted RBP23.86■■□□□ 1.41
VPS13B-204ENST00000441350 DIS3Q9Y2L1 958 aaKnown RBP23.86■■□□□ 1.41
VPS13B-204ENST00000441350 LRRC37A2A6NM11 1700 aa23.86■■□□□ 1.41
VPS13B-204ENST00000441350 VWA3AA6NCI4 1184 aa23.85■■□□□ 1.41
VPS13B-204ENST00000441350 EIF3JO75822 258 aaKnown RBP23.85■■□□□ 1.41
VPS13B-204ENST00000441350 STXBP2Q15833 593 aa23.85■■□□□ 1.41
VPS13B-204ENST00000441350 ZNF467Q7Z7K2 595 aaPredicted RBP23.85■■□□□ 1.41
VPS13B-204ENST00000441350 USP6NLQ92738 828 aa23.85■■□□□ 1.41
VPS13B-204ENST00000441350 WDR11Q9BZH6 1224 aa23.85■■□□□ 1.41
VPS13B-204ENST00000441350 CSRNP2Q9H175 543 aa23.85■■□□□ 1.41
VPS13B-204ENST00000441350 RGS20O76081 388 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 ARP10275 920 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 CMA1P23946 247 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 TXKP42681 527 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 LACTBP83111 547 aaPredicted RBP23.84■■□□□ 1.41
VPS13B-204ENST00000441350 SHC4Q6S5L8 630 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 DPP9Q86TI2 863 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 SLFN12Q8IYM2 578 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 MPHOSPH6Q99547 160 aaKnown RBP23.84■■□□□ 1.41
VPS13B-204ENST00000441350 KCNH7Q9NS40 1196 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 SAGE1Q9NXZ1 904 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 GJD2Q9UKL4 321 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 TNPO2O14787 897 aaKnown RBP23.84■■□□□ 1.41
VPS13B-204ENST00000441350 HOXC6P09630 235 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 FXR2P51116 673 aaKnown RBP eCLIP23.84■■□□□ 1.417e-6■■■■□ 23.7
VPS13B-204ENST00000441350 SP3Q02447 781 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 PDE4DQ08499 809 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 MAP2K5Q13163 448 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 SLC5A5Q92911 643 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 GJA10Q969M2 543 aa23.84■■□□□ 1.41
VPS13B-204ENST00000441350 GPRASP2Q96D09 838 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms