RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 GPT2Q8TD30 523 aa26.07■■□□□ 1.76
CPSF4-204ENST00000436336 ZNF236Q9UL36 1845 aa26.07■■□□□ 1.76
CPSF4-204ENST00000436336 MGAMO43451 1857 aa26.07■■□□□ 1.76
CPSF4-204ENST00000436336 KIAA1217Q5T5P2 1943 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 THSD7BQ9C0I4 1608 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 STRNO43815 780 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 TRAK2O60296 914 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 MAPK4P31152 587 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 PRR16Q569H4 304 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 DTHD1Q6ZMT9 781 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 FAM133AQ8N9E0 248 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 IL31RAQ8NI17 732 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 CLIC6Q96NY7 704 aa26.06■■□□□ 1.76
CPSF4-204ENST00000436336 ADD3Q9UEY8 706 aaKnown RBP26.06■■□□□ 1.76
CPSF4-204ENST00000436336 IGLV3-22A0A075B6J6 115 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 CEP55Q53EZ4 464 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 ABRAQ8N0Z2 381 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 LENG9Q96B70 501 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 IWS1Q96ST2 819 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 LRRC37A2A6NM11 1700 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 DNAJC25-GNG10A0A024R161 153 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 VWA3AA6NCI4 1184 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 TBX3O15119 743 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 CMA1P23946 247 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 CCND2P30279 289 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 MAP2K2P36507 400 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 SETQ01105 290 aaPredicted RBP26.05■■□□□ 1.76
CPSF4-204ENST00000436336 CNTN2Q02246 1040 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 GRIN1Q05586 938 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 KLHL40Q2TBA0 621 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 MRPS27Q92552 414 aaKnown RBP26.05■■□□□ 1.76
CPSF4-204ENST00000436336 MXRA8Q9BRK3 442 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 KCNMB3Q9NPA1 279 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 IVNS1ABPQ9Y6Y0 642 aa26.05■■□□□ 1.76
CPSF4-204ENST00000436336 NR3C2P08235 984 aa26.04■■□□□ 1.76
CPSF4-204ENST00000436336 MRPS9P82933 396 aaKnown RBP26.04■■□□□ 1.76
CPSF4-204ENST00000436336 IL17AQ16552 155 aa26.04■■□□□ 1.76
CPSF4-204ENST00000436336 SHC4Q6S5L8 630 aa26.04■■□□□ 1.76
CPSF4-204ENST00000436336 NIPA1Q7RTP0 329 aa26.04■■□□□ 1.76
CPSF4-204ENST00000436336 VSIG10LQ86VR7 867 aa26.04■■□□□ 1.76
CPSF4-204ENST00000436336 CYP2W1Q8TAV3 490 aa26.04■■□□□ 1.76
CPSF4-204ENST00000436336 CSRNP2Q9H175 543 aa26.04■■□□□ 1.76
CPSF4-204ENST00000436336 MEIS1O00470 390 aa26.03■■□□□ 1.76
CPSF4-204ENST00000436336 MYCLP12524 364 aaPredicted RBP26.03■■□□□ 1.76
CPSF4-204ENST00000436336 LONP1P36776 959 aaKnown RBP26.03■■□□□ 1.76
CPSF4-204ENST00000436336 ALDH5A1P51649 535 aaPredicted RBP26.03■■□□□ 1.76
CPSF4-204ENST00000436336 RESP18Q5W5W9 173 aa26.03■■□□□ 1.76
CPSF4-204ENST00000436336 GPR142Q7Z601 462 aa26.03■■□□□ 1.76
CPSF4-204ENST00000436336 HAS1Q92839 578 aa26.03■■□□□ 1.76
CPSF4-204ENST00000436336 UBIAD1Q9Y5Z9 338 aa26.03■■□□□ 1.76
CPSF4-204ENST00000436336 SOWAHBA6NEL2 793 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 MARCH6O60337 910 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 TXKP42681 527 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 VEGFBP49765 207 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 PLEKHH3Q7Z736 793 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 PLA2G4DQ86XP0 818 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 SLFN12Q8IYM2 578 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 FSIP1Q8NA03 581 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 ETNPPLQ8TBG4 499 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 B4DLN1 442 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 STAM2O75886 525 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 PGK2P07205 417 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 FAM20AQ96MK3 541 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 ASTN1O14525 1302 aa26.02■■□□□ 1.76
CPSF4-204ENST00000436336 ITGB5P18084 799 aa26.01■■□□□ 1.75
CPSF4-204ENST00000436336 HTRA3P83110 453 aa26.01■■□□□ 1.75
CPSF4-204ENST00000436336 TMEM266Q2M3C6 531 aa26.01■■□□□ 1.75
CPSF4-204ENST00000436336 CCDC73Q6ZRK6 1079 aa26.01■■□□□ 1.75
CPSF4-204ENST00000436336 DOCK3Q8IZD9 2030 aa26.01■■□□□ 1.75
CPSF4-204ENST00000436336 MPHOSPH6Q99547 160 aaKnown RBP26.01■■□□□ 1.75
CPSF4-204ENST00000436336 JADE2Q9NQC1 790 aa26.01■■□□□ 1.75
CPSF4-204ENST00000436336 MCM3APO60318 1980 aa26.01■■□□□ 1.75
CPSF4-204ENST00000436336 LOC102724159A0A0B4J2E5 919 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 FAM237AA0A1B0GTK4 181 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 MSH4O15457 936 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 FXR2P51116 673 aaKnown RBP eCLIP26■■□□□ 1.75
CPSF4-204ENST00000436336 GRB14Q14449 540 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 PWP2Q15269 919 aaKnown RBP26■■□□□ 1.75
CPSF4-204ENST00000436336 ZFP91Q96JP5 570 aaPredicted RBP26■■□□□ 1.75
CPSF4-204ENST00000436336 GOLPH3LQ9H4A5 285 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 FAM13BQ9NYF5 915 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 A0A1B0GVL5 298 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 LIG1P18858 919 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 EDNRBP24530 442 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 ADORA2AP29274 412 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 SPECC1Q5M775 1068 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 AK8Q96MA6 479 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 RAB34Q9BZG1 259 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 TTC12Q9H892 705 aaPredicted RBP26■■□□□ 1.75
CPSF4-204ENST00000436336 PCDHA12Q9UN75 941 aa26■■□□□ 1.75
CPSF4-204ENST00000436336 TECP42680 631 aa25.99■■□□□ 1.75
CPSF4-204ENST00000436336 STXBP2Q15833 593 aa25.99■■□□□ 1.75
CPSF4-204ENST00000436336 IGSF22Q8N9C0 903 aa25.99■■□□□ 1.75
CPSF4-204ENST00000436336 FGD4Q96M96 766 aa25.99■■□□□ 1.75
CPSF4-204ENST00000436336 CFHR5Q9BXR6 569 aa25.99■■□□□ 1.75
CPSF4-204ENST00000436336 HPSEQ9Y251 543 aa25.99■■□□□ 1.75
CPSF4-204ENST00000436336 SLC15A5A6NIM6 579 aa25.98■■□□□ 1.75
CPSF4-204ENST00000436336 PFKFB1P16118 471 aa25.98■■□□□ 1.75
CPSF4-204ENST00000436336 FAM160A1Q05DH4 1040 aa25.98■■□□□ 1.75
CPSF4-204ENST00000436336 MTMR1Q13613 665 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms