RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PPATQ06203 517 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 ANKRD13AQ8IZ07 590 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 PNMA5Q96PV4 448 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 HSD3B7Q9H2F3 369 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 RMND1Q9NWS8 449 aa17.1■□□□□ 0.33
ACTB-204ENST00000425660 ZNF214Q9UL59 606 aaPredicted RBP17.1■□□□□ 0.33
ACTB-204ENST00000425660 FRMPD4Q14CM0 1322 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 MSH4O15457 936 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 ALAS1P13196 640 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 ERCC5P28715 1186 aaPredicted RBP17.09■□□□□ 0.33
ACTB-204ENST00000425660 KCNB1Q14721 858 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 GJA10Q969M2 543 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 BLOC1S4Q9NUP1 217 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 HOXC10Q9NYD6 342 aa17.09■□□□□ 0.33
ACTB-204ENST00000425660 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.33
ACTB-204ENST00000425660 CEP55Q53EZ4 464 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 ERO1BQ86YB8 467 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 PLIN2Q99541 437 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 NUDT12Q9BQG2 462 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 TRIM9Q9C026 710 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 MAF1Q9H063 256 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 COL20A1Q9P218 1284 aa17.08■□□□□ 0.33
ACTB-204ENST00000425660 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.32
ACTB-204ENST00000425660 SPDYE5A6NIY4 337 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 AMPD3Q01432 767 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 ENOX1Q8TC92 643 aaKnown RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 NT5C3AQ9H0P0 336 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 SPDYE16A6NNV3 312 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 MEIS1O00470 390 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 KLRC4O43908 158 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 ZNF76P36508 570 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 ZNF75DP51815 510 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 TPM4P67936 248 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 SETQ01105 290 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 ZNF658Q5TYW1 1059 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 CNNM4Q6P4Q7 775 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 PROCA1Q8NCQ7 364 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 SYTL5Q8TDW5 730 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
ACTB-204ENST00000425660 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 MRFAP1L1Q96HT8 127 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 TRIM5Q9C035 493 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 VAV3Q9UKW4 847 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 STK24Q9Y6E0 443 aa17.07■□□□□ 0.32
ACTB-204ENST00000425660 PTPRFP10586 1907 aa17.06■□□□□ 0.32
ACTB-204ENST00000425660 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
ACTB-204ENST00000425660 CXCL11O14625 94 aa17.06■□□□□ 0.32
ACTB-204ENST00000425660 RHOBTB3O94955 611 aa17.06■□□□□ 0.32
ACTB-204ENST00000425660 RPS6P62753 249 aaKnown RBP17.06■□□□□ 0.32
ACTB-204ENST00000425660 FMR1Q06787 632 aaKnown RBP eCLIP17.06■□□□□ 0.321e-47■□□□□ 8.3
ACTB-204ENST00000425660 TMEM132BQ14DG7 1078 aa17.06■□□□□ 0.32
ACTB-204ENST00000425660 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
ACTB-204ENST00000425660 LARP4BQ92615 738 aaKnown RBP17.06■□□□□ 0.32
ACTB-204ENST00000425660 KCNH4Q9UQ05 1017 aa17.06■□□□□ 0.32
ACTB-204ENST00000425660 RIPK3Q9Y572 518 aa17.06■□□□□ 0.32
ACTB-204ENST00000425660 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 IRF6O14896 467 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 BCRP11274 1271 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 CDC25BP30305 580 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
ACTB-204ENST00000425660 ECM1Q16610 540 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
ACTB-204ENST00000425660 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 SV2BQ7L1I2 683 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 NIPA1Q7RTP0 329 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 RAD54LQ92698 747 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 SLC5A5Q92911 643 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 MED15Q96RN5 788 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 TEX13BQ9BXU2 312 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 HOMER2Q9NSB8 354 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 RBBP6Q7Z6E9 1792 aaKnown RBP17.05■□□□□ 0.32
ACTB-204ENST00000425660 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
ACTB-204ENST00000425660 TKFCQ3LXA3 575 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 PCNX4Q63HM2 1172 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 SNRNP48Q6IEG0 339 aaKnown RBP17.05■□□□□ 0.32
ACTB-204ENST00000425660 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 ELP3Q9H9T3 547 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 RNF146Q9NTX7 359 aa17.05■□□□□ 0.32
ACTB-204ENST00000425660 UNCXA6NJT0 531 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 PSMD10O75832 226 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 RPA1P27694 616 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 CCT6AP40227 531 aaKnown RBP17.04■□□□□ 0.32
ACTB-204ENST00000425660 PPIL2Q13356 520 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 PPP2R5CQ13362 524 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 RNF207Q6ZRF8 634 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 OTOP1Q7RTM1 612 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms