RNA–Protein interactions for RNA: ENST00000421359.5

TTC38-203, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 4

Gene TTC38, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-203ENST00000421359 HOMER1Q86YM7 354 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 CTCFLQ8NI51 663 aaPredicted RBP18.11■□□□□ 0.49
TTC38-203ENST00000421359 PHOSPHO2Q8TCD6 241 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 AFAP1L1Q8TED9 768 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 CUL5Q93034 780 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 MTA3Q9BTC8 594 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 WNT8AQ9H1J5 351 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 SEC63Q9UGP8 760 aaKnown RBP18.11■□□□□ 0.49
TTC38-203ENST00000421359 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
TTC38-203ENST00000421359 UMODL1Q5DID0 1318 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 PNMA6FA0A0J9YX94 578 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 BAIAP3O94812 1187 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 CYP21A2P08686 494 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 MYCLP12524 364 aaPredicted RBP18.1■□□□□ 0.49
TTC38-203ENST00000421359 GSPT1P15170 499 aaKnown RBP18.1■□□□□ 0.49
TTC38-203ENST00000421359 KCNJ6P48051 423 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 GHRHRQ02643 423 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 PPP2R2DQ66LE6 453 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 DEFB128Q7Z7B8 93 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 IL27Q8NEV9 243 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 PPTC7Q8NI37 304 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 COPS5Q92905 334 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 SCLYQ96I15 445 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 DDX41Q9UJV9 622 aaKnown RBP18.1■□□□□ 0.49
TTC38-203ENST00000421359 SCN10AQ9Y5Y9 1956 aa18.1■□□□□ 0.49
TTC38-203ENST00000421359 LAMA2P24043 3122 aaKnown RBP18.09■□□□□ 0.49
TTC38-203ENST00000421359 GRXCR1A8MXD5 290 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 E7EWF7 191 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 PPFIA4O75335 1185 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 PTGS1P23219 599 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 ARHGAP1Q07960 439 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 STOX1Q6ZVD7 989 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 CYB5R4Q7L1T6 521 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 TBC1D5Q92609 795 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 MTMR8Q96EF0 704 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 MAP3K14Q99558 947 aa18.09■□□□□ 0.49
TTC38-203ENST00000421359 SGSM2O43147 1006 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 EFCAB14O75071 495 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 ARIH2O95376 493 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 IQCF3P0C7M6 154 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 CALM1P0DP23 149 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 CALM2P0DP24 149 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 CALM3P0DP25 149 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 PDE4AP27815 886 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 PBX2P40425 430 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 NFXL1Q6ZNB6 911 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 RRP36Q96EU6 259 aaKnown RBP18.08■□□□□ 0.48
TTC38-203ENST00000421359 PDCD2LQ9BRP1 358 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 NKX2-4Q9H2Z4 354 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 RIOX1Q9H6W3 641 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 MLXIPQ9HAP2 919 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 CXXC1Q9P0U4 656 aaPredicted RBP18.08■□□□□ 0.48
TTC38-203ENST00000421359 COL20A1Q9P218 1284 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 KIAA1217Q5T5P2 1943 aa18.08■□□□□ 0.48
TTC38-203ENST00000421359 NOP56O00567 594 aaKnown RBP18.07■□□□□ 0.48
TTC38-203ENST00000421359 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
TTC38-203ENST00000421359 DDAH1O94760 285 aa18.07■□□□□ 0.48
TTC38-203ENST00000421359 IGFBP4P22692 258 aa18.07■□□□□ 0.48
TTC38-203ENST00000421359 SMARCA1P28370 1054 aa18.07■□□□□ 0.48
TTC38-203ENST00000421359 MCM5P33992 734 aa18.07■□□□□ 0.48
TTC38-203ENST00000421359 SPATA33Q96N06 139 aa18.07■□□□□ 0.48
TTC38-203ENST00000421359 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
TTC38-203ENST00000421359 PRDM12Q9H4Q4 367 aa18.07■□□□□ 0.48
TTC38-203ENST00000421359 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 SELPP16109 830 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 PSEN2P49810 448 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 PTH1RQ03431 593 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 NEDD9Q14511 834 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 MFSD10Q14728 455 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 PGM5Q15124 567 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 RNF20Q5VTR2 975 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 VSIG10LQ86VR7 867 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 FCHSD1Q86WN1 690 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 MAP4K1Q92918 833 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 TMEM87BQ96K49 555 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 PIGSQ96S52 555 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 GTF2IRD1Q9UHL9 959 aa18.06■□□□□ 0.48
TTC38-203ENST00000421359 GNAT1P11488 350 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 TROAPQ12815 778 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 PTK7Q13308 1070 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 KIAA0753Q2KHM9 967 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 TJAP1Q5JTD0 557 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 CELF3Q5SZQ8 465 aaKnown RBP18.05■□□□□ 0.48
TTC38-203ENST00000421359 XRRA1Q6P2D8 792 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 LRRC8DQ7L1W4 858 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 GIMAP8Q8ND71 665 aaPredicted RBP18.05■□□□□ 0.48
TTC38-203ENST00000421359 ATXN2LQ8WWM7 1075 aaKnown RBP18.05■□□□□ 0.48
TTC38-203ENST00000421359 ALG1Q9BT22 464 aa18.05■□□□□ 0.48
TTC38-203ENST00000421359 RBM8AQ9Y5S9 174 aaKnown RBP18.05■□□□□ 0.48
TTC38-203ENST00000421359 EMSYQ7Z589 1322 aa18.04■□□□□ 0.48
TTC38-203ENST00000421359 GGPS1O95749 300 aa18.04■□□□□ 0.48
TTC38-203ENST00000421359 F2P00734 622 aa18.04■□□□□ 0.48
TTC38-203ENST00000421359 HOXA13P31271 388 aaPredicted RBP18.04■□□□□ 0.48
TTC38-203ENST00000421359 AAK1Q2M2I8 961 aa18.04■□□□□ 0.48
TTC38-203ENST00000421359 PPM1EQ8WY54 764 aa18.04■□□□□ 0.48
TTC38-203ENST00000421359 ZBED2Q9BTP6 218 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms