RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 RAB34Q9BZG1 259 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 TDRD3Q9H7E2 651 aaKnown RBP18.04■□□□□ 0.48
CTSB-203ENST00000420692 TFR2Q9UP52 801 aa18.04■□□□□ 0.48
CTSB-203ENST00000420692 F5H6K3 240 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 TAL1P17542 331 aaPredicted RBP18.03■□□□□ 0.48
CTSB-203ENST00000420692 MTIF2P46199 727 aaKnown RBP18.03■□□□□ 0.48
CTSB-203ENST00000420692 HERVK_113P62684 666 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 KLRC3Q07444 240 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 LRRC41Q15345 812 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 HYIQ5T013 277 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
CTSB-203ENST00000420692 MBOAT7Q96N66 472 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 ERGIC2Q96RQ1 377 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 NOC4LQ9BVI4 516 aaKnown RBP18.03■□□□□ 0.48
CTSB-203ENST00000420692 KCNMB3Q9NPA1 279 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 CYP3A7-CYP3A51PA0A087WV96 503 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 YDJCA8MPS7 323 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 ZRANB2O95218 330 aaKnown RBP eCLIP18.03■□□□□ 0.48
CTSB-203ENST00000420692 GCFC2P16383 781 aaKnown RBP18.03■□□□□ 0.48
CTSB-203ENST00000420692 CYP3A7P24462 503 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 PRMT6Q96LA8 375 aaPredicted RBP18.03■□□□□ 0.48
CTSB-203ENST00000420692 FHOD1Q9Y613 1164 aa18.03■□□□□ 0.48
CTSB-203ENST00000420692 IDEP14735 1019 aa18.02■□□□□ 0.48
CTSB-203ENST00000420692 ICA1Q05084 483 aa18.02■□□□□ 0.48
CTSB-203ENST00000420692 LRRC55Q6ZSA7 311 aa18.02■□□□□ 0.48
CTSB-203ENST00000420692 FAM114A1Q8IWE2 563 aa18.02■□□□□ 0.48
CTSB-203ENST00000420692 FGFBP2Q9BYJ0 223 aa18.02■□□□□ 0.48
CTSB-203ENST00000420692 ANO3Q9BYT9 981 aa18.02■□□□□ 0.48
CTSB-203ENST00000420692 CDC23Q9UJX2 597 aa18.02■□□□□ 0.48
CTSB-203ENST00000420692 NDUFB10O96000 172 aa18.02■□□□□ 0.47
CTSB-203ENST00000420692 TMEM179Q6ZVK1 233 aa18.02■□□□□ 0.47
CTSB-203ENST00000420692 A0A1W2PRG0 241 aa18.01■□□□□ 0.47
CTSB-203ENST00000420692 E9PMD0 336 aa18.01■□□□□ 0.47
CTSB-203ENST00000420692 EPHB6O15197 1021 aa18.01■□□□□ 0.47
CTSB-203ENST00000420692 STAT3P40763 770 aa18.01■□□□□ 0.47
CTSB-203ENST00000420692 USP11P51784 963 aa18.01■□□□□ 0.47
CTSB-203ENST00000420692 SIK3Q9Y2K2 1263 aa18.01■□□□□ 0.47
CTSB-203ENST00000420692 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
CTSB-203ENST00000420692 RCCD1A6NED2 376 aa18■□□□□ 0.47
CTSB-203ENST00000420692 OPLAHO14841 1288 aa18■□□□□ 0.47
CTSB-203ENST00000420692 ZBED6P86452 979 aa18■□□□□ 0.47
CTSB-203ENST00000420692 ABCB5Q2M3G0 1257 aa18■□□□□ 0.47
CTSB-203ENST00000420692 TEX35Q5T0J7 233 aa18■□□□□ 0.47
CTSB-203ENST00000420692 GMCL1P1Q8NEA9 526 aa18■□□□□ 0.47
CTSB-203ENST00000420692 ZSWIM4Q9H7M6 989 aa18■□□□□ 0.47
CTSB-203ENST00000420692 NPHP3-ACAD11A0A0J9YXS1 232 aa18■□□□□ 0.47
CTSB-203ENST00000420692 TRIM21P19474 475 aaKnown RBP18■□□□□ 0.47
CTSB-203ENST00000420692 SPIRE1Q08AE8 756 aa18■□□□□ 0.47
CTSB-203ENST00000420692 COASYQ13057 564 aa18■□□□□ 0.47
CTSB-203ENST00000420692 VWA3BQ502W6 1294 aa18■□□□□ 0.47
CTSB-203ENST00000420692 ZCWPW2Q504Y3 356 aa18■□□□□ 0.47
CTSB-203ENST00000420692 GPR161Q8N6U8 529 aaKnown RBP18■□□□□ 0.47
CTSB-203ENST00000420692 RETREG2Q8NC44 543 aa18■□□□□ 0.47
CTSB-203ENST00000420692 NUP58Q9BVL2 599 aa18■□□□□ 0.47
CTSB-203ENST00000420692 KIAA1024Q9UPX6 916 aa18■□□□□ 0.47
CTSB-203ENST00000420692 PCDHA2Q9Y5H9 948 aa18■□□□□ 0.47
CTSB-203ENST00000420692 POTEB3A0JP26 581 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 CTAGE9A4FU28 777 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 POTECB2RU33 542 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 MED24O75448 989 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 GH2P01242 217 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 AMPD2Q01433 879 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 PSMD2Q13200 908 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 KIF4BQ2VIQ3 1234 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 FIGNQ5HY92 759 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 POTEBQ6S5H4 581 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 SRGAP1Q7Z6B7 1085 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 ETNPPLQ8TBG4 499 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 RABGGTAQ92696 567 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 LENG9Q96B70 501 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 GMCL1Q96IK5 515 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 TNS1Q9HBL0 1735 aaKnown RBP17.99■□□□□ 0.47
CTSB-203ENST00000420692 SEC31AO94979 1220 aaKnown RBP17.99■□□□□ 0.47
CTSB-203ENST00000420692 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
CTSB-203ENST00000420692 PARD6BQ9BYG5 372 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 GLT8D2Q9H1C3 349 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 NDST4Q9H3R1 872 aa17.99■□□□□ 0.47
CTSB-203ENST00000420692 PUF60Q9UHX1 559 aaKnown RBP17.99■□□□□ 0.47
CTSB-203ENST00000420692 A0A1W2PQJ5 194 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 MARCH6O60337 910 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 ENTPD3O75355 529 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 PNMA6AP0CW24 399 aaPredicted RBP17.98■□□□□ 0.47
CTSB-203ENST00000420692 MMP14P50281 582 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 ARHGAP4P98171 946 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 LRRC63Q05C16 580 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 ARSHQ5FYA8 562 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 KIAA1755Q5JYT7 1200 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 NAPGQ99747 312 aaPredicted RBP17.98■□□□□ 0.47
CTSB-203ENST00000420692 LACRTQ9GZZ8 138 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 NHEJ1Q9H9Q4 299 aaPredicted RBP17.98■□□□□ 0.47
CTSB-203ENST00000420692 MYO1AQ9UBC5 1043 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 GUCA1BQ9UMX6 200 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 ZNF263O14978 683 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 PLA2G4BP0C869 781 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 ERCC3P19447 782 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 KRT222Q8N1A0 295 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 GOLGA1Q92805 767 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 CNKSR1Q969H4 720 aa17.98■□□□□ 0.47
CTSB-203ENST00000420692 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms