RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 URI1O94763 535 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 ERCC3P19447 782 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 LRRC41Q15345 812 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 DHTKD1Q96HY7 919 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 CNOT6LQ96LI5 555 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 FGFBP2Q9BYJ0 223 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 STK17AQ9UEE5 414 aa16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-202ENST00000409472 PSMD14O00487 310 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 CCDC175P0C221 793 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 IDEP14735 1019 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 FECHP22830 423 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 EEF1GP26641 437 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 IKQ13123 557 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 KRT79Q5XKE5 535 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 ANKRD20A12PQ8NF67 263 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 ACER1Q8TDN7 264 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 DDX12PQ92771 950 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 CHP1Q99653 195 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 HOXA13P31271 388 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 KRT9P35527 623 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 PDIA5Q14554 519 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 TUBGCP2Q9BSJ2 902 aa16.95■□□□□ 0.3
SCAMP4-202ENST00000409472 POTEB3A0JP26 581 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 POTECB2RU33 542 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 E9PMD0 336 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 ENTPD3O75355 529 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 MIIPQ5JXC2 388 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 CC2D2BQ6DHV5 1058 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 POTEBQ6S5H4 581 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 GMCL1P1Q8NEA9 526 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 NPHP3-ACAD11A0A0J9YXS1 232 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 FBXO38Q6PIJ6 1188 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 CRYGNQ8WXF5 182 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 KCNMB3Q9NPA1 279 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 PCDHA12Q9UN75 941 aa16.94■□□□□ 0.3
SCAMP4-202ENST00000409472 AMPD3Q01432 767 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 RBM26Q5T8P6 1007 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 SYDE2Q5VT97 1194 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 CNNM4Q6P4Q7 775 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 SLC30A10Q6XR72 485 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 CCDC84Q86UT8 332 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 GMCL1Q96IK5 515 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 CARD6Q9BX69 1037 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 NAA15Q9BXJ9 866 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 RAB34Q9BZG1 259 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 TFR2Q9UP52 801 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 MARCH6O60337 910 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 TFRCP02786 760 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 SSBP05455 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 BMP3P12645 472 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 ARHGAP4P98171 946 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 EHHADHQ08426 723 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 DNAJC19Q96DA6 116 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 AGPAT5Q9NUQ2 364 aa16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 REXO2Q9Y3B8 237 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-202ENST00000409472 SHTN1A0MZ66 631 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 FAM86B1E9PN63 330 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 FAM86B2P0C5J1 330 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 DPEP1P16444 411 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 KCNA3P22001 575 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 PRR16Q569H4 304 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 GPIHBP1Q8IV16 184 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 CYP2W1Q8TAV3 490 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 CCDC47Q96A33 483 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 LENG9Q96B70 501 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 GMLQ99445 158 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 SLF1Q9BQI6 1058 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 AMNQ9BXJ7 453 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 EPC1Q9H2F5 836 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 TBC1D7Q9P0N9 293 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 MAGEC2Q9UBF1 373 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 KIAA1024Q9UPX6 916 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 POTEFA5A3E0 1075 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 MED24O75448 989 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 GCFC2P16383 781 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 ZYXQ15942 572 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 CENPPQ6IPU0 288 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 WDR59Q6PJI9 974 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 POTEEQ6S8J3 1075 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 FBXO11Q86XK2 927 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 LARGE2Q8N3Y3 721 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 CCDC51Q96ER9 411 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 TTYH3Q9C0H2 523 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 TMEM39BQ9GZU3 492 aa16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 ZNF70Q9UC06 446 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-202ENST00000409472 PRR12Q9ULL5 1215 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms