RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 RAD21O60216 631 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 SHOX2O60902 331 aaPredicted RBP16.25■□□□□ 0.19
CCNF-202ENST00000397066 PRPHP41219 470 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 FIGNQ5HY92 759 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 NELFCDQ8IXH7 590 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
CCNF-202ENST00000397066 STXBP3O00186 592 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 GUCY2CP25092 1073 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 HSPA2P54652 639 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 MAPKAPK5Q8IW41 473 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 TBC1D5Q92609 795 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 BAG3O95817 575 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 LDHBP07195 334 aaKnown RBP16.25■□□□□ 0.19
CCNF-202ENST00000397066 NR1D1P20393 614 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 TNNI2P48788 182 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 TTMPQ5BVD1 217 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 KIAA0895Q8NCT3 520 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
CCNF-202ENST00000397066 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 ANKIB1Q9P2G1 1089 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 MYH6P13533 1939 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 ZSCAN5CA6NGD5 496 aaPredicted RBP16.25■□□□□ 0.19
CCNF-202ENST00000397066 CAMTA2O94983 1202 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 PRLRP16471 622 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 KLHL30Q0D2K2 578 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 SEMA3FQ13275 785 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 CCDC91Q7Z6B0 441 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 MAD2L2Q9UI95 211 aa16.25■□□□□ 0.19
CCNF-202ENST00000397066 COL18A1P39060 1754 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 NKRFO15226 690 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCNF-202ENST00000397066 USP17L2Q6R6M4 530 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 MTMR8Q96EF0 704 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 ZC3H4Q9UPT8 1303 aaKnown RBP16.24■□□□□ 0.19
CCNF-202ENST00000397066 MYH2Q9UKX2 1941 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 KCNK3O14649 394 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 FGRP09769 529 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 APBA1Q02410 837 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 GLE1Q53GS7 698 aaKnown RBP16.24■□□□□ 0.19
CCNF-202ENST00000397066 RUBCNQ92622 972 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 ATP2C2O75185 946 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 GLI1P08151 1106 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
CCNF-202ENST00000397066 PDXDC1Q6P996 788 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 MYOCDQ8IZQ8 938 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 SPAG5Q96R06 1193 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 LRRC27Q9C0I9 530 aa16.24■□□□□ 0.19
CCNF-202ENST00000397066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCNF-202ENST00000397066 UNC13DQ70J99 1090 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 TLR10Q9BXR5 811 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 IL17RBQ9NRM6 502 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 ZNF804BA4D1E1 1349 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 GOLGA6L7A0A1B0GV03 622 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 MYMKA6NI61 221 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 CEP104O60308 925 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 SIK1P57059 783 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 ZNF384Q8TF68 577 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
CCNF-202ENST00000397066 LZTS2Q9BRK4 669 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 POTEMA6NI47 508 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 FAM153BP0C7A2 387 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 IFT88Q13099 833 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 FAM153CQ494X1 144 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 ZSCAN29Q8IWY8 852 aaPredicted RBP16.23■□□□□ 0.19
CCNF-202ENST00000397066 LRRC15Q8TF66 581 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 NLRP3Q96P20 1036 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 PIGSQ96S52 555 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 TMEM260Q9NX78 707 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 ADAMTS1Q9UHI8 967 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 FAM153AQ9UHL3 310 aa16.23■□□□□ 0.19
CCNF-202ENST00000397066 ITIH3Q06033 890 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 RPS6KA1Q15418 735 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 TMED8Q6PL24 325 aaPredicted RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 UBLCP1Q8WVY7 318 aaPredicted RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 MYZAPP0CAP1 466 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 HNRNPH1P31943 449 aaKnown RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 RNF10Q8N5U6 811 aaKnown RBP16.22■□□□□ 0.19
CCNF-202ENST00000397066 RNF14Q9UBS8 474 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 CHD4Q14839 1912 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 CYTH3O43739 400 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 DIXDC1Q155Q3 683 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 ASIC2Q16515 512 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 CENPPQ6IPU0 288 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 CCDC121Q6ZUS5 278 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 ARFGAP2Q8N6H7 521 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 PLAAQ9Y263 795 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 SIK3Q9Y2K2 1263 aa16.22■□□□□ 0.19
CCNF-202ENST00000397066 DDX60Q8IY21 1712 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms