RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 CTNND2Q9UQB3 1225 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 IGLV3-22A0A075B6J6 115 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 ALAS1P13196 640 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 ZNF18P17022 549 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 ZNF76P36508 570 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 PRCPP42785 496 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 USP14P54578 494 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 TMEM119Q4V9L6 283 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.4■■□□□ 1.02
CLDND1-203ENST00000394181 ATG4CQ96DT6 458 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 CDK5RAP3Q96JB5 506 aa21.4■■□□□ 1.02
CLDND1-203ENST00000394181 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.39■■□□□ 1.01
CLDND1-203ENST00000394181 FILIP1Q7Z7B0 1213 aa21.39■■□□□ 1.01
CLDND1-203ENST00000394181 C17orf53Q8N3J3 647 aaPredicted RBP21.39■■□□□ 1.01
CLDND1-203ENST00000394181 C7orf25Q9BPX7 421 aa21.39■■□□□ 1.01
CLDND1-203ENST00000394181 MYMKA6NI61 221 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 GOLGA6L6A8MZA4 724 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 SERPINC1P01008 464 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 CCT6AP40227 531 aaKnown RBP21.38■■□□□ 1.01
CLDND1-203ENST00000394181 CNKSR2Q8WXI2 1034 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 HPS3Q969F9 1004 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 DCPSQ96C86 337 aaKnown RBP21.38■■□□□ 1.01
CLDND1-203ENST00000394181 AS3MTQ9HBK9 375 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 PITPNM2Q9BZ72 1349 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 SV2BQ7L1I2 683 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 LARP4BQ92615 738 aaKnown RBP21.38■■□□□ 1.01
CLDND1-203ENST00000394181 RAD54LQ92698 747 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 MAGEF1Q9HAY2 307 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 INTS13Q9NVM9 706 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 RMND1Q9NWS8 449 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 SYNRGQ9UMZ2 1314 aa21.38■■□□□ 1.01
CLDND1-203ENST00000394181 VWA5AO00534 786 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 MED24O75448 989 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 CLCN1P35523 988 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 HSD17B4P51659 736 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 UBASH3AP57075 661 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 ASIC1P78348 528 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 VGLL4Q14135 290 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 SPATA1Q5VX52 437 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 SLFN12Q8IYM2 578 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 CACTINQ8WUQ7 758 aaKnown RBP21.37■■□□□ 1.01
CLDND1-203ENST00000394181 PYCARDQ9ULZ3 195 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 AFG3L2Q9Y4W6 797 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 RIPK3Q9Y572 518 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 POTEB3A0JP26 581 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 POTECB2RU33 542 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 MYL1P05976 194 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 KCNB1Q14721 858 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 POTEBQ6S5H4 581 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 SULF1Q8IWU6 871 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 KIAA1024Q9UPX6 916 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 SNCAIPQ9Y6H5 919 aa21.37■■□□□ 1.01
CLDND1-203ENST00000394181 E9PMD0 336 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 RHOBTB3O94955 611 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 NCAPH2Q6IBW4 605 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 DYMQ7RTS9 669 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 PURBQ96QR8 312 aaKnown RBP21.36■■□□□ 1.01
CLDND1-203ENST00000394181 STK17AQ9UEE5 414 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 VAV3Q9UKW4 847 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 TBX3O15119 743 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 FCER1AP12319 257 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 CDK11BP21127 795 aaKnown RBP21.36■■□□□ 1.01
CLDND1-203ENST00000394181 STK4Q13043 487 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 CT47A1Q5JQC4 288 aaPredicted RBP21.36■■□□□ 1.01
CLDND1-203ENST00000394181 NOL9Q5SY16 702 aaKnown RBP21.36■■□□□ 1.01
CLDND1-203ENST00000394181 KRT26Q7Z3Y9 468 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 TMC6Q7Z403 805 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 NELFBQ8WX92 580 aa21.36■■□□□ 1.01
CLDND1-203ENST00000394181 PMS1P54277 932 aaKnown RBP21.35■■□□□ 1.01
CLDND1-203ENST00000394181 MOB2Q70IA6 237 aa21.35■■□□□ 1.01
CLDND1-203ENST00000394181 ADSSL1Q8N142 457 aa21.35■■□□□ 1.01
CLDND1-203ENST00000394181 GIMAP8Q8ND71 665 aaPredicted RBP21.35■■□□□ 1.01
CLDND1-203ENST00000394181 IL31RAQ8NI17 732 aa21.35■■□□□ 1.01
CLDND1-203ENST00000394181 FAM20AQ96MK3 541 aa21.35■■□□□ 1.01
CLDND1-203ENST00000394181 PHIPQ8WWQ0 1821 aa21.35■■□□□ 1.01
CLDND1-203ENST00000394181 TRIM49BA6NDI0 452 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 EML1O00423 815 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 ZBED4O75132 1171 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 PDE4DQ08499 809 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 HYIQ5T013 277 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 CATSPER3Q86XQ3 398 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 C12orf42Q96LP6 360 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 POTEFA5A3E0 1075 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 MEIS1O00470 390 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 POTEIP0CG38 1075 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 ARP10275 920 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 MAP3K9P80192 1104 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 AMPD3Q01432 767 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 PAK1Q13153 545 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 POTEGQ6S5H5 508 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 POTEEQ6S8J3 1075 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 RWDD2AQ9UIY3 292 aa21.34■■□□□ 1.01
CLDND1-203ENST00000394181 C19orf81C9J6K1 198 aa21.33■■□□□ 1.01
CLDND1-203ENST00000394181 ZNF500O60304 480 aaPredicted RBP21.33■■□□□ 1.01
CLDND1-203ENST00000394181 SPATA31C1P0DKV0 1188 aa21.33■■□□□ 1.01
CLDND1-203ENST00000394181 PSMC6P62333 389 aa21.33■■□□□ 1.01
CLDND1-203ENST00000394181 CEP55Q53EZ4 464 aa21.33■■□□□ 1.01
CLDND1-203ENST00000394181 DPY19L2Q6NUT2 758 aa21.33■■□□□ 1.01
CLDND1-203ENST00000394181 APTXQ7Z2E3 356 aaKnown RBP21.33■■□□□ 1.01
CLDND1-203ENST00000394181 REPS2Q8NFH8 660 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms