RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 FKBP1CQ5VVH2 108 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 FBXO11Q86XK2 927 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 TEX2Q8IWB9 1127 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 SLFN12Q8IYM2 578 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 FAM151AQ8WW52 585 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 DDX12PQ92771 950 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 HPS3Q969F9 1004 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 GJA10Q969M2 543 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 DNAJC19Q96DA6 116 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 WDR24Q96S15 920 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 NT5C3AQ9H0P0 336 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 VPS33BQ9H267 617 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.1□□□□□ -0.79
TDP1-202ENST00000393452 SLC39A2Q9NP94 309 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 MAGEC2Q9UBF1 373 aaPredicted RBP10.1□□□□□ -0.79
TDP1-202ENST00000393452 ZNF70Q9UC06 446 aaPredicted RBP10.1□□□□□ -0.79
TDP1-202ENST00000393452 CNTNAP1P78357 1384 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 OPLAHO14841 1288 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 TBX3O15119 743 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 KRT9P35527 623 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 SREBF1P36956 1147 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 ERVK-24P63145 666 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 SPIRE1Q08AE8 756 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 MIIPQ5JXC2 388 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 CYP26C1Q6V0L0 522 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 CREBRFQ8IUR6 639 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 ETNPPLQ8TBG4 499 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 KIFC2Q96AC6 838 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 CNOT6LQ96LI5 555 aaKnown RBP10.1□□□□□ -0.79
TDP1-202ENST00000393452 DNAJC7Q99615 494 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 TTYH3Q9C0H2 523 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 CAPN11Q9UMQ6 739 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 TTC26A0AVF1 554 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 TCP10L2B9ZVM9 353 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 PIK3CDO00329 1044 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 CIITAP33076 1130 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 Q4G0T1 1027 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 DYMQ7RTS9 669 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 LARGE2Q8N3Y3 721 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 RETREG2Q8NC44 543 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 MTMR14Q8NCE2 650 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 LENG9Q96B70 501 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 HDAC9Q9UKV0 1011 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 TMX2Q9Y320 296 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 ABCB11O95342 1321 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 B4DLN1 442 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 MARCH6O60337 910 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 TBC1D12O60347 775 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 RAD17O75943 681 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 GNG11P61952 73 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 LRRC63Q05C16 580 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 DEFB132Q7Z7B7 95 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 OR8K1Q8NGG5 319 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 ERGIC2Q96RQ1 377 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 CGNQ9P2M7 1197 aaKnown RBP10.09□□□□□ -0.79
TDP1-202ENST00000393452 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
TDP1-202ENST00000393452 LUC7L2Q9Y383 392 aaKnown RBP10.09□□□□□ -0.79
TDP1-202ENST00000393452 CLRN2A0PK11 232 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 DPEP1P16444 411 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 ECE1P42892 770 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 SNAP25P60880 206 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 MAP3K9P80192 1104 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 AGBL3Q8NEM8 1001 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 PKNOX2Q96KN3 472 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 NUP58Q9BVL2 599 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 CCDC94Q9BW85 323 aaPredicted RBP10.08□□□□□ -0.8
TDP1-202ENST00000393452 ARHGEF10LQ9HCE6 1279 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 ZNF277Q9NRM2 450 aaPredicted RBP10.08□□□□□ -0.8
TDP1-202ENST00000393452 RASSF10A6NK89 507 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 SPDYE3A6NKU9 549 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 URI1O94763 535 aaPredicted RBP10.08□□□□□ -0.8
TDP1-202ENST00000393452 CYP3A4P08684 503 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 IDEP14735 1019 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 CASQ1P31415 396 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 STAT2P52630 851 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 TBC1D8BQ0IIM8 1120 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 COASYQ13057 564 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 TRAF1Q13077 416 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 IKQ13123 557 aaPredicted RBP10.08□□□□□ -0.8
TDP1-202ENST00000393452 ELF2Q15723 593 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 MEA1Q16626 185 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 USH1GQ495M9 461 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 FIGNQ5HY92 759 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 KIAA1755Q5JYT7 1200 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 LRRC55Q6ZSA7 311 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 FAM83AQ86UY5 434 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 LRRN4CLQ8ND94 238 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 SLC16A10Q8TF71 515 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 EEF2KMTQ96G04 330 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 ZBED3Q96IU2 234 aaPredicted RBP10.08□□□□□ -0.8
TDP1-202ENST00000393452 FAM20AQ96MK3 541 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 ZBTB21Q9ULJ3 1066 aa10.08□□□□□ -0.8
TDP1-202ENST00000393452 KIAA1024Q9UPX6 916 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms