RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PDRG1Q9NUG6 133 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 RBM28Q9NW13 759 aaKnown RBP10.68□□□□□ -0.7
HMGN1-202ENST00000380747 NRBP1Q9UHY1 535 aa10.68□□□□□ -0.7
HMGN1-202ENST00000380747 DDX49Q9Y6V7 483 aaKnown RBP10.68□□□□□ -0.7
HMGN1-202ENST00000380747 hCG_1642624A0A1W2PR95 340 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 CFBP00751 764 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 ZNF865P0CJ78 1059 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-202ENST00000380747 AKR1A1P14550 325 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 METAP2P50579 478 aaKnown RBP eCLIP10.67□□□□□ -0.7
HMGN1-202ENST00000380747 ALDH5A1P51649 535 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-202ENST00000380747 FOSBP53539 338 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 ACVR2BQ13705 512 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-202ENST00000380747 FAM184BQ9ULE4 1060 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 GTF3C3Q9Y5Q9 886 aa10.67□□□□□ -0.7
HMGN1-202ENST00000380747 ASTN1O14525 1302 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 RARBP10826 455 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 ANAPC15P60006 121 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 PDE4DQ08499 809 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 TSR1Q2NL82 804 aaKnown RBP10.66□□□□□ -0.7
HMGN1-202ENST00000380747 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 EEPD1Q7L9B9 569 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 FBXO16Q8IX29 292 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-202ENST00000380747 TAAR1Q96RJ0 339 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 MPHOSPH6Q99547 160 aaKnown RBP10.66□□□□□ -0.7
HMGN1-202ENST00000380747 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 XPNPEP3Q9NQH7 507 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
HMGN1-202ENST00000380747 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
HMGN1-202ENST00000380747 CCDC196A0A1B0GTZ2 297 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 B4DLN1 442 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 GCOM1H8Y6P7 765 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 OPLAHO14841 1288 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 POLR2MP0CAP2 368 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 CDC27P30260 824 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 HOXA13P31271 388 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 ADD1P35611 737 aaKnown RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 MRPL12P52815 198 aaKnown RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 RCAN1P53805 252 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 TOB2Q14106 344 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 CCDC144BQ3MJ40 725 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 GJC2Q5T442 439 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 NOL8Q76FK4 1167 aaKnown RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 HEATR3Q7Z4Q2 680 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 ARRDC4Q8NCT1 418 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 DNERQ8NFT8 737 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 LENG1Q96BZ8 264 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 RMDN3Q96TC7 470 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 AGXT2Q9BYV1 514 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 KATNBL1Q9H079 304 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 NPDC1Q9NQX5 325 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 FAM217BQ9NTX9 383 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 COL20A1Q9P218 1284 aa10.65□□□□□ -0.7
HMGN1-202ENST00000380747 V9GY48 417 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-202ENST00000380747 CNTNAP5Q8WYK1 1306 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 LOC102724159A0A0B4J2E5 919 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 KBTBD13C9JR72 458 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 PGK1P00558 417 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 EIF2AK2P19525 551 aaKnown RBP10.64□□□□□ -0.71
HMGN1-202ENST00000380747 PDIA3P30101 505 aaKnown RBP10.64□□□□□ -0.71
HMGN1-202ENST00000380747 ADCYAP1R1P41586 468 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 HSD17B4P51659 736 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 CCT2P78371 535 aaKnown RBP10.64□□□□□ -0.71
HMGN1-202ENST00000380747 MDM2Q00987 491 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-202ENST00000380747 TNFAIP2Q03169 654 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 PPP2R5BQ15173 497 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 PWP2Q15269 919 aaKnown RBP10.64□□□□□ -0.71
HMGN1-202ENST00000380747 ARHGEF16Q5VV41 709 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 FCHSD1Q86WN1 690 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 FBXL16Q8N461 479 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 MORC4Q8TE76 937 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 NSUN6Q8TEA1 469 aaKnown RBP10.64□□□□□ -0.71
HMGN1-202ENST00000380747 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.712e-6■■■■□ 20.4
HMGN1-202ENST00000380747 CUL5Q93034 780 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 LBHD1Q9BQE6 289 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-202ENST00000380747 MAF1Q9H063 256 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 VTA1Q9NP79 307 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 PDGFCQ9NRA1 345 aa10.64□□□□□ -0.71
HMGN1-202ENST00000380747 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-202ENST00000380747 DNM1LO00429 736 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 EVCP57679 992 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 GHRHRQ02643 423 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 FUT2Q10981 343 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 STK3Q13188 491 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 LRRC41Q15345 812 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 RNF180Q86T96 592 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 SAMD3Q8N6K7 520 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 SMARCC2Q8TAQ2 1214 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
HMGN1-202ENST00000380747 PXMP2Q9NR77 195 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 MAP3K20Q9NYL2 800 aaKnown RBP10.63□□□□□ -0.71
HMGN1-202ENST00000380747 SMCHD1A6NHR9 2005 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 NID2Q14112 1375 aa10.63□□□□□ -0.71
HMGN1-202ENST00000380747 SYNRGQ9UMZ2 1314 aa10.62□□□□□ -0.71
HMGN1-202ENST00000380747 ADCY6O43306 1168 aa10.62□□□□□ -0.71
HMGN1-202ENST00000380747 PPFIA3O75145 1194 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms