RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 RASSF7Q02833 373 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 TTBK2Q6IQ55 1244 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 EHBP1Q8NDI1 1231 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 MTMR9Q96QG7 549 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 EHD4Q9H223 541 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 RSPH14Q9UHP6 348 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 RRP15Q9Y3B9 282 aaKnown RBP22.61■■□□□ 1.21
CLN5-201ENST00000377453 MYH1P12882 1939 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 NRAPQ86VF7 1730 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 SLC16A2P36021 539 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 GRAPQ13588 217 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 RETREG2Q8NC44 543 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 GRAPLQ8TC17 118 aaPredicted RBP22.61■■□□□ 1.21
CLN5-201ENST00000377453 POLD4Q9HCU8 107 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 CCNL1Q9UK58 526 aaPredicted RBP22.61■■□□□ 1.21
CLN5-201ENST00000377453 PLAGL2Q9UPG8 496 aa22.61■■□□□ 1.21
CLN5-201ENST00000377453 RTCBQ9Y3I0 505 aaKnown RBP22.61■■□□□ 1.21
CLN5-201ENST00000377453 NPHP3-ACAD11A0A0J9YXS1 232 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 SLC1A4P43007 532 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 GSTO1P78417 241 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 AMPD3Q01432 767 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 SND1Q7KZF4 910 aaKnown RBP eCLIP22.6■■□□□ 1.21
CLN5-201ENST00000377453 ZNF804AQ7Z570 1209 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 NELFCDQ8IXH7 590 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 CD209Q9NNX6 404 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 PDHBP11177 359 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 DNAAF5Q86Y56 855 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 AFAP1L1Q8TED9 768 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 MTMR8Q96EF0 704 aa22.6■■□□□ 1.21
CLN5-201ENST00000377453 MAST2Q6P0Q8 1798 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 RHBDL3P58872 404 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 ARID5AQ03989 594 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 TTC19Q6DKK2 380 aaPredicted RBP22.59■■□□□ 1.21
CLN5-201ENST00000377453 LRRC55Q6ZSA7 311 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 UNC13DQ70J99 1090 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 SRLQ86TD4 932 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 AKR1B1P15121 316 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 MFSD14BQ5SR56 506 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 BAP1Q92560 729 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 OSBPL9Q96SU4 736 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 LZTS2Q9BRK4 669 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 MAGEF1Q9HAY2 307 aa22.59■■□□□ 1.21
CLN5-201ENST00000377453 DDX60LQ5H9U9 1706 aaKnown RBP22.59■■□□□ 1.21
CLN5-201ENST00000377453 MYH10P35580 1976 aa22.58■■□□□ 1.21
CLN5-201ENST00000377453 PPP1R11O60927 126 aaPredicted RBP22.58■■□□□ 1.21
CLN5-201ENST00000377453 TACC1O75410 805 aa22.58■■□□□ 1.21
CLN5-201ENST00000377453 NAP1L1P55209 391 aaKnown RBP22.58■■□□□ 1.21
CLN5-201ENST00000377453 RNASE9P60153 205 aaKnown RBP22.58■■□□□ 1.21
CLN5-201ENST00000377453 KCNMA1Q12791 1236 aa22.58■■□□□ 1.21
CLN5-201ENST00000377453 TDRD12Q587J7 1177 aaKnown RBP22.58■■□□□ 1.21
CLN5-201ENST00000377453 MED4Q9NPJ6 270 aa22.58■■□□□ 1.21
CLN5-201ENST00000377453 A0A1W2PQJ5 194 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 MAGEA1P43355 309 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 MAN2A1Q16706 1144 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 DNAJC21Q5F1R6 531 aaKnown RBP22.58■■□□□ 1.2
CLN5-201ENST00000377453 ZNF662Q6ZS27 426 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 BARGINQ6ZT62 677 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 MSL3Q8N5Y2 521 aaKnown RBP22.58■■□□□ 1.2
CLN5-201ENST00000377453 SPATA4Q8NEY3 305 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 RAD54LQ92698 747 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 NAV1Q8NEY1 1877 aa22.58■■□□□ 1.2
CLN5-201ENST00000377453 SBF2Q86WG5 1849 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 FAM170AA1A519 330 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 ANO9A1A5B4 782 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 RAD21O60216 631 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 AARSP49588 968 aaKnown RBP eCLIP22.57■■□□□ 1.2
CLN5-201ENST00000377453 ADCY7P51828 1080 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 PTPROQ16827 1216 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 DPP8Q6V1X1 898 aaPredicted RBP22.57■■□□□ 1.2
CLN5-201ENST00000377453 ACBD3Q9H3P7 528 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 PACSIN2Q9UNF0 486 aaPredicted RBP22.57■■□□□ 1.2
CLN5-201ENST00000377453 ZSCAN5CA6NGD5 496 aaPredicted RBP22.57■■□□□ 1.2
CLN5-201ENST00000377453 USO1O60763 962 aaKnown RBP22.57■■□□□ 1.2
CLN5-201ENST00000377453 LDHCP07864 332 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 MAP9Q49MG5 647 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 BBXQ8WY36 941 aaPredicted RBP22.57■■□□□ 1.2
CLN5-201ENST00000377453 MXD3Q9BW11 206 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 CWC15Q9P013 229 aaKnown RBP22.57■■□□□ 1.2
CLN5-201ENST00000377453 LEMD3Q9Y2U8 911 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 JRKLQ9Y4A0 524 aa22.57■■□□□ 1.2
CLN5-201ENST00000377453 TARSL2A2RTX5 802 aaKnown RBP22.56■■□□□ 1.2
CLN5-201ENST00000377453 CACNA2D4Q7Z3S7 1137 aa22.56■■□□□ 1.2
CLN5-201ENST00000377453 TSEN2Q8NCE0 465 aaKnown RBP22.56■■□□□ 1.2
CLN5-201ENST00000377453 TRIM58Q8NG06 486 aa22.56■■□□□ 1.2
CLN5-201ENST00000377453 GPR75-ASB3A0A0A6YYF3 556 aa22.56■■□□□ 1.2
CLN5-201ENST00000377453 TUBBP07437 444 aa22.56■■□□□ 1.2
CLN5-201ENST00000377453 RFC4P35249 363 aa22.56■■□□□ 1.2
CLN5-201ENST00000377453 FIGNQ5HY92 759 aa22.56■■□□□ 1.2
CLN5-201ENST00000377453 ESYT3A0FGR9 886 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 E9PMD0 336 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 PPARDQ03181 441 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 CNBD1Q8NA66 436 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 RBM12Q9NTZ6 932 aaKnown RBP22.55■■□□□ 1.2
CLN5-201ENST00000377453 TLR2O60603 784 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 FTCDO95954 541 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 SHROOM1Q2M3G4 852 aaPredicted RBP22.55■■□□□ 1.2
CLN5-201ENST00000377453 PDXDC1Q6P996 788 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 AENQ8WTP8 325 aaKnown RBP22.55■■□□□ 1.2
CLN5-201ENST00000377453 RIOX1Q9H6W3 641 aa22.55■■□□□ 1.2
CLN5-201ENST00000377453 VIPAS39Q9H9C1 493 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms