RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PRDM10Q9NQV6 1147 aa17.84■□□□□ 0.45
CNKSR1-202ENST00000374253 CGNQ9P2M7 1197 aaKnown RBP17.84■□□□□ 0.45
CNKSR1-202ENST00000374253 GOLGA6L9A6NEM1 432 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 TBC1D8BQ0IIM8 1120 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 ARHGAP29Q52LW3 1261 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 KIAA1755Q5JYT7 1200 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 ZNF569Q5MCW4 686 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 UNC13DQ70J99 1090 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 MRIQ9BWK5 157 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 VEZTQ9HBM0 779 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 STK32BQ9NY57 414 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 TRIM10Q9UDY6 481 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 STK17AQ9UEE5 414 aa17.83■□□□□ 0.45
CNKSR1-202ENST00000374253 BICDL2A1A5D9 508 aa17.83■□□□□ 0.44
CNKSR1-202ENST00000374253 TUBB4AP04350 444 aa17.83■□□□□ 0.44
CNKSR1-202ENST00000374253 MIGA2Q7L4E1 593 aa17.83■□□□□ 0.44
CNKSR1-202ENST00000374253 CCDC84Q86UT8 332 aaPredicted RBP17.83■□□□□ 0.44
CNKSR1-202ENST00000374253 ZFP91Q96JP5 570 aaPredicted RBP17.83■□□□□ 0.44
CNKSR1-202ENST00000374253 POLD4Q9HCU8 107 aa17.83■□□□□ 0.44
CNKSR1-202ENST00000374253 LUC7L2Q9Y383 392 aaKnown RBP17.83■□□□□ 0.44
CNKSR1-202ENST00000374253 PSMD14O00487 310 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 TRIM21P19474 475 aaKnown RBP17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 FKBP1AP62942 108 aaKnown RBP17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 TMEM119Q4V9L6 283 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 CC2D2BQ6DHV5 1058 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 CYP26C1Q6V0L0 522 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 CYP2W1Q8TAV3 490 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 ARFGEF1Q9Y6D6 1849 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 RASSF10A6NK89 507 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 MEIS1O00470 390 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 BMP3P12645 472 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 MIIPQ5JXC2 388 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 SYDE2Q5VT97 1194 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 FBXO11Q86XK2 927 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 TMTC1Q8IUR5 882 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 CCDC51Q96ER9 411 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 ZHX3Q9H4I2 956 aa17.82■□□□□ 0.44
CNKSR1-202ENST00000374253 POTEFA5A3E0 1075 aa17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 POTEIP0CG38 1075 aa17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 ARHGAP4P98171 946 aa17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 POTEGQ6S5H5 508 aa17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 POTEEQ6S8J3 1075 aa17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 LARGE2Q8N3Y3 721 aa17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 ZNF397Q8NF99 534 aaPredicted RBP17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 UBXN4Q92575 508 aa17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 ZNF646O15015 1829 aaPredicted RBP17.81■□□□□ 0.44
CNKSR1-202ENST00000374253 FAM86B1E9PN63 330 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 KIF5CO60282 957 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 MED24O75448 989 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 FAM86B2P0C5J1 330 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 DNM2P50570 870 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 CENPPQ6IPU0 288 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 WDR59Q6PJI9 974 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 NELFCDQ8IXH7 590 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 CCDC155Q8N6L0 562 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 OR8K1Q8NGG5 319 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 TBC1D5Q92609 795 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 CAMKK2Q96RR4 588 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 REXO2Q9Y3B8 237 aaKnown RBP17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 UBXN2AP68543 259 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 COASYQ13057 564 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 TRIM14Q14142 442 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 CCDC174Q6PII3 467 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 SLC35F6Q8N357 371 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 DNAJC19Q96DA6 116 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 TMEM39BQ9GZU3 492 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 MRFAP1Q9Y605 127 aa17.8■□□□□ 0.44
CNKSR1-202ENST00000374253 OPLAHO14841 1288 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 ENTPD3O75355 529 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 TADA3O75528 432 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 PSMC6P62333 389 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 PPP2R3AQ06190 1150 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 TEX35Q5T0J7 233 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 FAM207AQ9NSI2 230 aaPredicted RBP17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 PRR12Q9ULL5 1215 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 EPN1Q9Y6I3 576 aaPredicted RBP17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 C10orf71Q711Q0 1435 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 TNS1Q9HBL0 1735 aaKnown RBP17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 PVALEFA0A1B0GWK0 134 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 EPHB6O15197 1021 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 GCFC2P16383 781 aaKnown RBP17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 FECHP22830 423 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 CYP4A11Q02928 519 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 FAM83BQ5T0W9 1011 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 POTEAQ6S8J7 498 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 GMCL1P1Q8NEA9 526 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 NOC3LQ8WTT2 800 aaKnown RBP17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 KCNMB3Q9NPA1 279 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 PANK4Q9NVE7 773 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 TMOD2Q9NZR1 351 aa17.79■□□□□ 0.44
CNKSR1-202ENST00000374253 PUF60Q9UHX1 559 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms