RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MCF2L2Q86YR7 1114 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 CKAP2LQ8IYA6 745 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 SYMPKQ92797 1274 aaKnown RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 AGBL1Q96MI9 1066 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 P2RX7Q99572 595 aaKnown RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 HOXC10Q9NYD6 342 aa13.64□□□□□ -0.23
USF1-203ENST00000368021 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
USF1-203ENST00000368021 TDP2O95551 362 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 CFBP00751 764 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 CYP3A4P08684 503 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 TAL1P17542 331 aaPredicted RBP13.63□□□□□ -0.23
USF1-203ENST00000368021 MSNP26038 577 aaKnown RBP13.63□□□□□ -0.23
USF1-203ENST00000368021 HOXA7P31268 230 aaPredicted RBP13.63□□□□□ -0.23
USF1-203ENST00000368021 HSD17B4P51659 736 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 ARHGAP4P98171 946 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 CALCRLQ16602 461 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 KRBA2Q6ZNG9 492 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 REPS2Q8NFH8 660 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 SMCR8Q8TEV9 937 aaPredicted RBP13.63□□□□□ -0.23
USF1-203ENST00000368021 ATG4CQ96DT6 458 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 EPSTI1Q96J88 318 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 DDX25Q9UHL0 483 aaKnown RBP13.63□□□□□ -0.23
USF1-203ENST00000368021 USP25Q9UHP3 1055 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 CPA4Q9UI42 421 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
USF1-203ENST00000368021 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
USF1-203ENST00000368021 SLC37A4O43826 429 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 HOXA13P31271 388 aaPredicted RBP13.62□□□□□ -0.23
USF1-203ENST00000368021 CIITAP33076 1130 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 TXLNAP40222 546 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 KANK3Q6NY19 840 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 CLEC4DQ8WXI8 215 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 CCDC34Q96HJ3 373 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 MAF1Q9H063 256 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 EHMT1Q9H9B1 1298 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 RAVER2Q9HCJ3 691 aaKnown RBP13.62□□□□□ -0.23
USF1-203ENST00000368021 HOOK1Q9UJC3 728 aaKnown RBP13.62□□□□□ -0.23
USF1-203ENST00000368021 TLR2O60603 784 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
USF1-203ENST00000368021 TYRO3Q06418 890 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 SASS6Q6UVJ0 657 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 CPXCR1Q8N123 301 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 IGSF22Q8N9C0 903 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 CNNM3Q8NE01 707 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 PARK7Q99497 189 aaKnown RBP13.62□□□□□ -0.23
USF1-203ENST00000368021 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 PRDM10Q9NQV6 1147 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 RABGAP1Q9Y3P9 1069 aa13.62□□□□□ -0.23
USF1-203ENST00000368021 COL11A1P12107 1806 aaPredicted RBP13.61□□□□□ -0.23
USF1-203ENST00000368021 RBBP6Q7Z6E9 1792 aaKnown RBP13.61□□□□□ -0.23
USF1-203ENST00000368021 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
USF1-203ENST00000368021 ACTN4O43707 911 aaKnown RBP13.61□□□□□ -0.23
USF1-203ENST00000368021 CAVIN2O95810 425 aa13.61□□□□□ -0.23
USF1-203ENST00000368021 PDIA5Q14554 519 aa13.61□□□□□ -0.23
USF1-203ENST00000368021 Q4G0T1 1027 aa13.61□□□□□ -0.23
USF1-203ENST00000368021 TBC1D5Q92609 795 aa13.61□□□□□ -0.23
USF1-203ENST00000368021 CCDC94Q9BW85 323 aaPredicted RBP13.61□□□□□ -0.23
USF1-203ENST00000368021 CFHR5Q9BXR6 569 aa13.61□□□□□ -0.23
USF1-203ENST00000368021 RAB34Q9BZG1 259 aa13.61□□□□□ -0.23
USF1-203ENST00000368021 ASCC2Q9H1I8 757 aaPredicted RBP13.61□□□□□ -0.23
USF1-203ENST00000368021 ZNF214Q9UL59 606 aaPredicted RBP13.61□□□□□ -0.23
USF1-203ENST00000368021 NFIBO00712 420 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 TBX3O15119 743 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 PEX10O60683 326 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 SLFN14P0C7P3 912 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 ALAS1P13196 640 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 IRX3P78415 501 aaPredicted RBP13.6□□□□□ -0.23
USF1-203ENST00000368021 TMEM266Q2M3C6 531 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 TKFCQ3LXA3 575 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 MB21D1Q8N884 522 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 TEX13BQ9BXU2 312 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 RBSNQ9H1K0 784 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 ZCCHC17Q9NP64 241 aaKnown RBP13.6□□□□□ -0.23
USF1-203ENST00000368021 KCNMB3Q9NPA1 279 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 A0A087X0B3 334 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 FKTNO75072 461 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 OSBPP22059 807 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 UBA7P41226 1012 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 MDM2Q00987 491 aaPredicted RBP13.6□□□□□ -0.23
USF1-203ENST00000368021 SP3Q02447 781 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 E2F4Q16254 413 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 LBX2Q6XYB7 198 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 FCHSD1Q86WN1 690 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 SLFN12Q8IYM2 578 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 ANKRD13CQ8N6S4 541 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 PDILTQ8N807 584 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 HAS1Q92839 578 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
USF1-203ENST00000368021 A0A0G2JMZ2 1700 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 TECP42680 631 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 TXKP42681 527 aa13.59□□□□□ -0.23
USF1-203ENST00000368021 SLC20A2Q08357 652 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms