RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 DNM3Q9UQ16 869 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 ZMYND12Q9H0C1 365 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 PCDHA4Q9UN74 947 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 LRRC53A6NM62 1247 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 H7C1W4 665 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 RASGRF2O14827 1237 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 BACH1O14867 736 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 LTKP29376 864 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 RUBCNQ92622 972 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 RIC8AQ9NPQ8 531 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 CDHR2Q9BYE9 1310 aa17.45■□□□□ 0.38
CLSTN1-201ENST00000361311 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 BIRC2Q13490 618 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 NUGGCQ68CJ6 796 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 LCORLQ8N3X6 602 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 GBP7Q8N8V2 638 aaPredicted RBP17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 CD248Q9HCU0 757 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 COL4A3BPQ9Y5P4 624 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 PLEKHG2Q9H7P9 1386 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 BCRP11274 1271 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 MIPOL1Q8TD10 442 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 TSC22D3Q99576 134 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 TXNDC9O14530 226 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 MAP2K7O14733 419 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 MCAMP43121 646 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 GFPT1Q06210 699 aaPredicted RBP17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 CAPRIN2Q6IMN6 1127 aaKnown RBP17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 ZIM3Q96PE6 472 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 PASKQ96RG2 1323 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 INO80Q9ULG1 1556 aaPredicted RBP17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 POLE2P56282 527 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 ADCY1Q08828 1119 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 BICD1Q96G01 975 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 VCX3BQ9H321 246 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
CLSTN1-201ENST00000361311 GUCY1A2P33402 732 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 PDE6CP51160 858 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 SGMS1Q86VZ5 419 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 NBPF5PQ86XG9 351 aaPredicted RBP17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 PALLDQ8WX93 1383 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 VPS37BQ9H9H4 285 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 KLRF2D3W0D1 207 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 CHMP6Q96FZ7 201 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 KIAA1210Q9ULL0 1709 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 EXOC3O60645 756 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 HIBADHP31937 336 aaKnown RBP17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 ADCY8P40145 1251 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 IL9RQ01113 521 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 ARPP21Q9UBL0 812 aaPredicted RBP17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 PLEKHG1Q9ULL1 1385 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 GOLGA8HP0CJ92 632 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 PCDHA12Q9UN75 941 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 PTPN22Q9Y2R2 807 aa17.43■□□□□ 0.38
CLSTN1-201ENST00000361311 C6orf118Q5T5N4 469 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 ALKBH5Q6P6C2 394 aaKnown RBP17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 KIFAP3Q92845 792 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 TFR2Q9UP52 801 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 PCP11498 1178 aaKnown RBP17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 PLCG2P16885 1265 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 FAM167BQ9BTA0 163 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 SLC40A1Q9NP59 571 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 TXLNGQ9NUQ3 528 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 KRT5P13647 590 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 EIF6P56537 245 aaKnown RBP17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 TRAPPC11Q7Z392 1133 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 DDX47Q9H0S4 455 aaKnown RBP17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 AGPAT5Q9NUQ2 364 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 KDM3AQ9Y4C1 1321 aa17.42■□□□□ 0.38
CLSTN1-201ENST00000361311 COL3A1P02461 1466 aaPredicted RBP17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 NR2F2P24468 414 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 ERVK-24P63145 666 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 SEPT2Q15019 361 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 LRRC8CQ8TDW0 803 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 MAIP1Q8WWC4 291 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 METTL14Q9HCE5 456 aaKnown RBP17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 DR1Q01658 176 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 GRIN1Q05586 938 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 SUGP1Q8IWZ8 645 aaKnown RBP17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 KIFC2Q96AC6 838 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 RNPC3Q96LT9 517 aaKnown RBP17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 SCOCQ9UIL1 159 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 PACSIN2Q9UNF0 486 aaPredicted RBP17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 FAM107AO95990 144 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 ADCY2Q08462 1091 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 DPYDQ12882 1025 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 MAP7Q14244 749 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 C10orf76Q5T2E6 689 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 MYCT1Q8N699 235 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 RPGRQ92834 1020 aaKnown RBP17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 SMARCAL1Q9NZC9 954 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 LRRC63Q05C16 580 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 PTPAQ15257 358 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 ARHGEF18Q6ZSZ5 1173 aa17.41■□□□□ 0.38
CLSTN1-201ENST00000361311 RDH13Q8NBN7 331 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms