RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SEMA3FQ13275 785 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 NR1I3Q14994 352 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 FCHSD1Q86WN1 690 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 CTAGE1Q96RT6 745 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 FBXO28Q9NVF7 368 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 HACL1Q9UJ83 578 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 TRIM49BA6NDI0 452 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 PSMA7O14818 248 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 GOLGA8FQ08AF8 430 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 GOLGA8DPQ0D2H9 430 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 FAM160B2Q86V87 743 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 CREBRFQ8IUR6 639 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
HOXA9-201ENST00000343483 RAD54LQ92698 747 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 MBOAT7Q96N66 472 aa20.82■□□□□ 0.92
HOXA9-201ENST00000343483 RANBP17Q9H2T7 1088 aaKnown RBP20.82■□□□□ 0.92
HOXA9-201ENST00000343483 CFBP00751 764 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 CCT6AP40227 531 aaKnown RBP20.81■□□□□ 0.92
HOXA9-201ENST00000343483 KIF4BQ2VIQ3 1234 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 TMEM119Q4V9L6 283 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 KCNK18Q7Z418 384 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 SLFN12Q8IYM2 578 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 TMX1Q9H3N1 280 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 FEM1BQ9UK73 627 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 MYMKA6NI61 221 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 PIK3CDO00329 1044 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 TBX2Q13207 712 aaPredicted RBP20.81■□□□□ 0.92
HOXA9-201ENST00000343483 ECM1Q16610 540 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 FILIP1LQ4L180 1135 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 KIF18AQ8NI77 898 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 DEFB129Q9H1M3 183 aa20.81■□□□□ 0.92
HOXA9-201ENST00000343483 ADD3Q9UEY8 706 aaKnown RBP20.81■□□□□ 0.92
HOXA9-201ENST00000343483 ZNF541Q9H0D2 1346 aa20.8■□□□□ 0.92
HOXA9-201ENST00000343483 FAM86B1E9PN63 330 aa20.8■□□□□ 0.92
HOXA9-201ENST00000343483 TEX33O43247 280 aa20.8■□□□□ 0.92
HOXA9-201ENST00000343483 FAM86B2P0C5J1 330 aa20.8■□□□□ 0.92
HOXA9-201ENST00000343483 PMS1P54277 932 aaKnown RBP20.8■□□□□ 0.92
HOXA9-201ENST00000343483 STK4Q13043 487 aa20.8■□□□□ 0.92
HOXA9-201ENST00000343483 DYMQ7RTS9 669 aa20.8■□□□□ 0.92
HOXA9-201ENST00000343483 CCP110O43303 1012 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 PLA2G6O60733 806 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 FCER1AP12319 257 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 STAT3P40763 770 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 KRT31Q15323 416 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 ETNPPLQ8TBG4 499 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 KDM3AQ9Y4C1 1321 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 KCNJ18B7U540 433 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 H7C1D1 291 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 ZNF76P36508 570 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 SPAG1Q07617 926 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 KCNJ12Q14500 433 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 Q4G0T1 1027 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 CNNM4Q6P4Q7 775 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 ANKRD20A12PQ8NF67 263 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 TBC1D5Q92609 795 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 HPS3Q969F9 1004 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 TRIM47Q96LD4 638 aa20.79■□□□□ 0.92
HOXA9-201ENST00000343483 GCOM1H8Y6P7 765 aaPredicted RBP20.78■□□□□ 0.92
HOXA9-201ENST00000343483 POLR2MP0CAP2 368 aa20.78■□□□□ 0.92
HOXA9-201ENST00000343483 TCP11X2Q5H9J9 407 aa20.78■□□□□ 0.92
HOXA9-201ENST00000343483 LENG9Q96B70 501 aa20.78■□□□□ 0.92
HOXA9-201ENST00000343483 NT5C3AQ9H0P0 336 aa20.78■□□□□ 0.92
HOXA9-201ENST00000343483 LIMA1Q9UHB6 759 aaKnown RBP20.78■□□□□ 0.92
HOXA9-201ENST00000343483 MRPL11Q9Y3B7 192 aaKnown RBP20.78■□□□□ 0.92
HOXA9-201ENST00000343483 ANKRD7Q92527 254 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 DHTKD1Q96HY7 919 aaPredicted RBP20.77■□□□□ 0.92
HOXA9-201ENST00000343483 LRRC27Q9C0I9 530 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 KIAA1024Q9UPX6 916 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 N4BP3O15049 544 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 TBX3O15119 743 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 CTNND1O60716 968 aaKnown RBP20.77■□□□□ 0.92
HOXA9-201ENST00000343483 DDNO94850 711 aaPredicted RBP20.77■□□□□ 0.92
HOXA9-201ENST00000343483 SSBP05455 408 aaKnown RBP eCLIP20.77■□□□□ 0.92
HOXA9-201ENST00000343483 IDEP14735 1019 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 INPP5BP32019 993 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 SYCP1Q15431 976 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 NBPF12Q5TAG4 269 aaPredicted RBP20.77■□□□□ 0.92
HOXA9-201ENST00000343483 UNC13DQ70J99 1090 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 LDHDQ86WU2 507 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 CYP2W1Q8TAV3 490 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 DDX12PQ92771 950 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 GTPBP4Q9BZE4 634 aaKnown RBP20.77■□□□□ 0.92
HOXA9-201ENST00000343483 VPS16Q9H269 839 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 SLC39A2Q9NP94 309 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 TAB2Q9NYJ8 693 aa20.77■□□□□ 0.92
HOXA9-201ENST00000343483 POTEB3A0JP26 581 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 POTECB2RU33 542 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 CIITAP33076 1130 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 ADKP55263 362 aaKnown RBP20.76■□□□□ 0.91
HOXA9-201ENST00000343483 HYIQ5T013 277 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 NCAPH2Q6IBW4 605 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 POTEBQ6S5H4 581 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 TMEM139Q8IV31 216 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 PVALEFA0A1B0GWK0 134 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 ARHGAP6O43182 974 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 NCBP1Q09161 790 aaKnown RBP20.76■□□□□ 0.91
HOXA9-201ENST00000343483 DGKZQ13574 1117 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 TTI2Q6NXR4 508 aa20.76■□□□□ 0.91
HOXA9-201ENST00000343483 KIAA0895Q8NCT3 520 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms