RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 LGALS16A8MUM7 142 aa17.21■□□□□ 0.34
HDAC5-202ENST00000336057 ZNF354CQ86Y25 554 aa17.21■□□□□ 0.34
HDAC5-202ENST00000336057 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.34
HDAC5-202ENST00000336057 LIG3P49916 1009 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 MYL7Q01449 175 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 VPS37BQ9H9H4 285 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 BUB1BO60566 1050 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-202ENST00000336057 SERPING1P05155 500 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 TTC19Q6DKK2 380 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-202ENST00000336057 HOOK2Q96ED9 719 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 FTCDO95954 541 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 CYP2D6P10635 497 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 ADCY8P40145 1251 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 PPP1R21Q6ZMI0 780 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 DEPTORQ8TB45 409 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 PGRMC1O00264 195 aaKnown RBP17.2■□□□□ 0.34
HDAC5-202ENST00000336057 GBP1P32455 592 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-202ENST00000336057 TMC4Q7Z404 712 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
HDAC5-202ENST00000336057 CHGBP05060 677 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 FAM114A2Q9NRY5 505 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 PLA2G4BP0C869 781 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
HDAC5-202ENST00000336057 SERPINB2P05120 415 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 PRDX5P30044 214 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 ARHGEF16Q5VV41 709 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 TRIM49BA6NDI0 452 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
HDAC5-202ENST00000336057 LIG4P49917 911 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 SNX16P57768 344 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 CC2D1AQ6P1N0 951 aaPredicted RBP17.19■□□□□ 0.34
HDAC5-202ENST00000336057 CCDC89Q8N998 374 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 MINPP1Q9UNW1 487 aa17.19■□□□□ 0.34
HDAC5-202ENST00000336057 RRP15Q9Y3B9 282 aaKnown RBP17.19■□□□□ 0.34
HDAC5-202ENST00000336057 FOXN1O15353 648 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 KRT19P08727 400 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 PRCPP42785 496 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 VPS41P49754 854 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 UBE2SQ16763 222 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 GNPTABQ3T906 1256 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 SPICE1Q8N0Z3 855 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 CIB2O75838 187 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 IFNB1P01574 187 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 DLATP10515 647 aaKnown RBP17.18■□□□□ 0.34
HDAC5-202ENST00000336057 ZNF131P52739 623 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 SLC8A3P57103 927 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 GRAPQ13588 217 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 C10orf76Q5T2E6 689 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 UHMK1Q8TAS1 419 aaKnown RBP17.18■□□□□ 0.34
HDAC5-202ENST00000336057 GRAPLQ8TC17 118 aaPredicted RBP17.18■□□□□ 0.34
HDAC5-202ENST00000336057 P3H4Q92791 437 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
HDAC5-202ENST00000336057 BAIAP2L1Q9UHR4 511 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 ADGRG1Q9Y653 693 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 PASKQ96RG2 1323 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 ADGRB1O14514 1584 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 AOC3Q16853 763 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 METTL16Q86W50 562 aaKnown RBP17.18■□□□□ 0.34
HDAC5-202ENST00000336057 VTI1AQ96AJ9 217 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 TEX33O43247 280 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 LGSNQ5TDP6 509 aa17.18■□□□□ 0.34
HDAC5-202ENST00000336057 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
HDAC5-202ENST00000336057 CPDO75976 1380 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 H0YCG3 227 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 MEIS1O00470 390 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 CLIC2O15247 247 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 UNC13DQ70J99 1090 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 PBKQ96KB5 322 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.17■□□□□ 0.34
HDAC5-202ENST00000336057 RAB20Q9NX57 234 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 NMT2O60551 498 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 IRX3P78415 501 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-202ENST00000336057 DMP1Q13316 513 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-202ENST00000336057 MESDQ14696 234 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 MAGOHBQ96A72 148 aaKnown RBP17.17■□□□□ 0.34
HDAC5-202ENST00000336057 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 TAF6LQ9Y6J9 622 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-202ENST00000336057 NEDD9Q14511 834 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-202ENST00000336057 TYW1Q9NV66 732 aaKnown RBP17.17■□□□□ 0.34
HDAC5-202ENST00000336057 DAAM1Q9Y4D1 1078 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
HDAC5-202ENST00000336057 ITIH3Q06033 890 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 MCUR1Q96AQ8 359 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 WDR11Q9BZH6 1224 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 GCNT4Q9P109 453 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 CCPG1Q9ULG6 757 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 TNFAIP1Q13829 316 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 PIK3C2BO00750 1634 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms