RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 RTFDC1Q9BY42 306 aaPredicted RBP19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 SH2D4AQ9H788 454 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 PLAGL2Q9UPG8 496 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 SLURP2P0DP57 97 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 RASSF7Q02833 373 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 ECM1Q16610 540 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 UBE2SQ16763 222 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 MAP9Q49MG5 647 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 CENPPQ6IPU0 288 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 TEX11Q8IYF3 940 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 RETREG2Q8NC44 543 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 CDK5RAP3Q96JB5 506 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 FGFBP2Q9BYJ0 223 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 NARFQ9UHQ1 456 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 NAV1Q8NEY1 1877 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 EDIL3O43854 480 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 SSBP05455 408 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 GALNT17Q6IS24 598 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 GOLGA6L1Q8N7Z2 621 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 WDR66Q8TBY9 1149 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 LARP4BQ92615 738 aaKnown RBP19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 SPZ1Q9BXG8 430 aa19.28■□□□□ 0.68
PTP4A3-201ENST00000329397 TUBBP07437 444 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 GNA11P29992 359 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 SLC1A4P43007 532 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 TNNI2P48788 182 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 NAP1L1P55209 391 aaKnown RBP19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 ARID5AQ03989 594 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 MSL3Q8N5Y2 521 aaKnown RBP19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 CUEDC2Q9H467 287 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 GPCPD1Q9NPB8 672 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 MAST2Q6P0Q8 1798 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 ROBO3Q96MS0 1386 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 AARSP49588 968 aaKnown RBP eCLIP19.27■□□□□ 0.688e-7■■■□□ 16.6
PTP4A3-201ENST00000329397 PICALMQ13492 652 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 TDRD12Q587J7 1177 aaKnown RBP19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 SPATA4Q8NEY3 305 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 SNX29Q8TEQ0 813 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 MTMR8Q96EF0 704 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 OSBPL9Q96SU4 736 aa19.27■□□□□ 0.68
PTP4A3-201ENST00000329397 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.67
PTP4A3-201ENST00000329397 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.67
PTP4A3-201ENST00000329397 TACC1O75410 805 aa19.27■□□□□ 0.67
PTP4A3-201ENST00000329397 RNASE9P60153 205 aaKnown RBP19.27■□□□□ 0.67
PTP4A3-201ENST00000329397 AMPD3Q01432 767 aa19.27■□□□□ 0.67
PTP4A3-201ENST00000329397 DDX12PQ92771 950 aa19.27■□□□□ 0.67
PTP4A3-201ENST00000329397 ANO9A1A5B4 782 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 ZSCAN5CA6NGD5 496 aaPredicted RBP19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 RASSF4Q9H2L5 321 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 JRKLQ9Y4A0 524 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 TNRC6CQ9HCJ0 1690 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 SBF2Q86WG5 1849 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 TARSL2A2RTX5 802 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 GOLGA6BA6NDN3 693 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 USO1O60763 962 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 MAGEA1P43355 309 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 NELFCDQ8IXH7 590 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 TRIM58Q8NG06 486 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 ARHGEF1Q92888 912 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 VIPAS39Q9H9C1 493 aa19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 PACSIN2Q9UNF0 486 aaPredicted RBP19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 DDX60LQ5H9U9 1706 aaKnown RBP19.26■□□□□ 0.67
PTP4A3-201ENST00000329397 ESYT3A0FGR9 886 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 PPARDQ03181 441 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 PTPROQ16827 1216 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 ZNF662Q6ZS27 426 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 CACNA2D4Q7Z3S7 1137 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 DNAAF5Q86Y56 855 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 MAN2A1Q16706 1144 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 LRRC55Q6ZSA7 311 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 UNC13DQ70J99 1090 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 BAP1Q92560 729 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 MTMR9Q96QG7 549 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 MAGEF1Q9HAY2 307 aa19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 THRAP3Q9Y2W1 955 aaKnown RBP19.25■□□□□ 0.67
PTP4A3-201ENST00000329397 A0A1W2PQJ5 194 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 CCDC181Q5TID7 509 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 C16orf86Q6ZW13 317 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 TSEN2Q8NCE0 465 aaKnown RBP19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 RBM12Q9NTZ6 932 aaKnown RBP19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 CDK5RAP2Q96SN8 1893 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 NPHP3-ACAD11A0A0J9YXS1 232 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 FAM170AA1A519 330 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 F8W031 263 aaPredicted RBP19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 IVLP07476 585 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 NEDD1Q8NHV4 660 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 AENQ8WTP8 325 aaKnown RBP19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 RPGRIP1Q96KN7 1286 aa19.24■□□□□ 0.67
PTP4A3-201ENST00000329397 PDHBP11177 359 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 SLC16A2P36021 539 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 KCNMA1Q12791 1236 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 FIGNQ5HY92 759 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 GOLGA6CA6NDK9 693 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 UFL1O94874 794 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 FTCDO95954 541 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 GOLGA6DP0CG33 693 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 MCM3P25205 808 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 PPP4CP60510 307 aa19.23■□□□□ 0.67
PTP4A3-201ENST00000329397 GPSM2P81274 684 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms