RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 MICALL2Q8IY33 904 aa17.83■□□□□ 0.44
SHISA2-201ENST00000319420 SLC16A10Q8TF71 515 aa17.83■□□□□ 0.44
SHISA2-201ENST00000319420 DDX12PQ92771 950 aa17.83■□□□□ 0.44
SHISA2-201ENST00000319420 GMCL1Q96IK5 515 aa17.83■□□□□ 0.44
SHISA2-201ENST00000319420 SOWAHDA6NJG2 315 aa17.82■□□□□ 0.44
SHISA2-201ENST00000319420 TOGARAM2Q6ZUX3 1019 aa17.82■□□□□ 0.44
SHISA2-201ENST00000319420 GOPCQ9HD26 462 aa17.82■□□□□ 0.44
SHISA2-201ENST00000319420 OPLAHO14841 1288 aa17.82■□□□□ 0.44
SHISA2-201ENST00000319420 GMPSP49915 693 aaPredicted RBP17.82■□□□□ 0.44
SHISA2-201ENST00000319420 COPB1P53618 953 aaKnown RBP17.82■□□□□ 0.44
SHISA2-201ENST00000319420 ANKRD40Q6AI12 368 aa17.82■□□□□ 0.44
SHISA2-201ENST00000319420 PPP4R3AQ6IN85 833 aa17.82■□□□□ 0.44
SHISA2-201ENST00000319420 CCDC47Q96A33 483 aaKnown RBP17.82■□□□□ 0.44
SHISA2-201ENST00000319420 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 CAP2P40123 477 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 FXR2P51116 673 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 AMPD3Q01432 767 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 NCBP1Q09161 790 aaKnown RBP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 KIAA0895Q8NCT3 520 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 GIMAP8Q8ND71 665 aaPredicted RBP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 NLGN2Q8NFZ4 835 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 FANCGO15287 622 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 RHOBTB3O94955 611 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 FXR1P51114 621 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 IRF2BP1Q8IU81 584 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 ANKRD20A12PQ8NF67 263 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 PCMTD1Q96MG8 357 aaPredicted RBP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 TMX2Q9Y320 296 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 A0A0U1RQJ8 604 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 RNF225M0QZC1 329 aaPredicted RBP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 KRT18P05783 430 aaKnown RBP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 REXO1L1PQ8IX06 675 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 AGBL3Q8NEM8 1001 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 ATRIPQ8WXE1 791 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 AGBL1Q96MI9 1066 aa17.81■□□□□ 0.44
SHISA2-201ENST00000319420 ZNF215Q9UL58 517 aaPredicted RBP17.81■□□□□ 0.44
SHISA2-201ENST00000319420 B4DLN1 442 aa17.8■□□□□ 0.44
SHISA2-201ENST00000319420 AKR1B15C9JRZ8 316 aaPredicted RBP17.8■□□□□ 0.44
SHISA2-201ENST00000319420 TULP1O00294 542 aaPredicted RBP17.8■□□□□ 0.44
SHISA2-201ENST00000319420 DLK2Q6UY11 383 aa17.8■□□□□ 0.44
SHISA2-201ENST00000319420 NELFCDQ8IXH7 590 aa17.8■□□□□ 0.44
SHISA2-201ENST00000319420 KIF18AQ8NI77 898 aa17.8■□□□□ 0.44
SHISA2-201ENST00000319420 PSMC6P62333 389 aa17.8■□□□□ 0.44
SHISA2-201ENST00000319420 PABPC4Q13310 644 aaKnown RBP eCLIP17.8■□□□□ 0.44
SHISA2-201ENST00000319420 RAD54LQ92698 747 aa17.8■□□□□ 0.44
SHISA2-201ENST00000319420 MAGEC2Q9UBF1 373 aaPredicted RBP17.8■□□□□ 0.44
SHISA2-201ENST00000319420 DDX39AO00148 427 aaKnown RBP17.79■□□□□ 0.44
SHISA2-201ENST00000319420 MED24O75448 989 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 INPP5BP32019 993 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 KLK7P49862 253 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 LRRN4CLQ8ND94 238 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 CTAGE1Q96RT6 745 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 FGFBP2Q9BYJ0 223 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 TANGO6Q9C0B7 1094 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 DNAI1Q9UI46 699 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 CNOT7Q9UIV1 285 aaKnown RBP17.79■□□□□ 0.44
SHISA2-201ENST00000319420 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
SHISA2-201ENST00000319420 MTIF2P46199 727 aaKnown RBP17.79■□□□□ 0.44
SHISA2-201ENST00000319420 KCNJ6P48051 423 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 TGFB2P61812 414 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 NBPF12Q5TAG4 269 aaPredicted RBP17.79■□□□□ 0.44
SHISA2-201ENST00000319420 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
SHISA2-201ENST00000319420 C7orf25Q9BPX7 421 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 VCPKMTQ9H867 229 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 RGL1Q9NZL6 768 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 MYH7BA7E2Y1 1941 aa17.79■□□□□ 0.44
SHISA2-201ENST00000319420 GYPCP04921 128 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 PRELPP51888 382 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 KCNB1Q14721 858 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 TRIM65Q6PJ69 517 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 P2RX5Q93086 422 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 BCAS3Q9H6U6 928 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 LZTFL1Q9NQ48 299 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 TTI2Q6NXR4 508 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 ANKRD7Q92527 254 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 ZKSCAN4Q969J2 545 aaPredicted RBP17.78■□□□□ 0.44
SHISA2-201ENST00000319420 DUSP9Q99956 384 aaKnown RBP17.78■□□□□ 0.44
SHISA2-201ENST00000319420 IRX2Q9BZI1 471 aaPredicted RBP17.78■□□□□ 0.44
SHISA2-201ENST00000319420 CUEDC2Q9H467 287 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
SHISA2-201ENST00000319420 PBX1P40424 430 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 PDIA5Q14554 519 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 CT47A1Q5JQC4 288 aaPredicted RBP17.77■□□□□ 0.44
SHISA2-201ENST00000319420 GPBP1Q86WP2 473 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 PPP2R2CQ9Y2T4 447 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 H7C1D1 291 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 CNNM4Q6P4Q7 775 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 DEFB129Q9H1M3 183 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 SEMA6BQ9H3T3 888 aa17.77■□□□□ 0.44
SHISA2-201ENST00000319420 ZBTB39O15060 712 aa17.77■□□□□ 0.43
SHISA2-201ENST00000319420 ARHGAP6O43182 974 aa17.77■□□□□ 0.43
SHISA2-201ENST00000319420 ASNSP08243 561 aa17.77■□□□□ 0.43
SHISA2-201ENST00000319420 GCFC2P16383 781 aaKnown RBP17.77■□□□□ 0.43
SHISA2-201ENST00000319420 TNIP1Q15025 636 aa17.77■□□□□ 0.43
SHISA2-201ENST00000319420 CNOT6LQ96LI5 555 aaKnown RBP17.77■□□□□ 0.43
SHISA2-201ENST00000319420 MSH4O15457 936 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 PLA2G4BP0C869 781 aa17.76■□□□□ 0.43
SHISA2-201ENST00000319420 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms