RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 EPHB4P54760 987 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 MESDQ14696 234 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 SGMS1Q86VZ5 419 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 CCDC17Q96LX7 622 aa18.85■□□□□ 0.61
GABRB3-202ENST00000311550 TERF2Q15554 542 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 ALX1Q15699 326 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 CAPN12Q6ZSI9 719 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 PAXIP1Q6ZW49 1069 aaPredicted RBP18.84■□□□□ 0.61
GABRB3-202ENST00000311550 DCP1AQ9NPI6 582 aaPredicted RBP18.84■□□□□ 0.61
GABRB3-202ENST00000311550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.84■□□□□ 0.61
GABRB3-202ENST00000311550 STK32BQ9NY57 414 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 MYL7Q01449 175 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 FAM186BQ8IYM0 893 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 PLA2G4BP0C869 781 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 SNAP25P60880 206 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 MTF1Q14872 753 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 ARHGEF16Q5VV41 709 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 IWS1Q96ST2 819 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 TMEM47Q9BQJ4 181 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 BAIAP2L1Q9UHR4 511 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 POTEMA6NI47 508 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 ADCY8P40145 1251 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 FYB2Q5VWT5 728 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 CACNA2D3Q8IZS8 1091 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 SUPT20HQ8NEM7 779 aa18.84■□□□□ 0.61
GABRB3-202ENST00000311550 GFPT2O94808 682 aa18.83■□□□□ 0.61
GABRB3-202ENST00000311550 ATP11AP98196 1134 aa18.83■□□□□ 0.61
GABRB3-202ENST00000311550 PTPN22Q9Y2R2 807 aa18.83■□□□□ 0.61
GABRB3-202ENST00000311550 ZNF335Q9H4Z2 1342 aaPredicted RBP18.83■□□□□ 0.61
GABRB3-202ENST00000311550 FAM205CA6NFA0 338 aa18.83■□□□□ 0.61
GABRB3-202ENST00000311550 GCFC2P16383 781 aaKnown RBP18.83■□□□□ 0.61
GABRB3-202ENST00000311550 CEP128Q6ZU80 1094 aa18.83■□□□□ 0.61
GABRB3-202ENST00000311550 STIM2Q9P246 746 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 BZW2Q9Y6E2 419 aaKnown RBP18.83■□□□□ 0.6
GABRB3-202ENST00000311550 BUB1BO60566 1050 aaPredicted RBP18.83■□□□□ 0.6
GABRB3-202ENST00000311550 STX2P32856 288 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 PDE6CP51160 858 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 ZNF131P52739 623 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 OTUD6AQ7L8S5 288 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 CSRNP1Q96S65 589 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 ADAMTS1Q9UHI8 967 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 DEPTORQ8TB45 409 aa18.83■□□□□ 0.6
GABRB3-202ENST00000311550 PXDNLA1KZ92 1463 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
GABRB3-202ENST00000311550 CTDNEP1O95476 244 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 CCZ1BP86790 482 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 CCZ1P86791 482 aaPredicted RBP18.82■□□□□ 0.6
GABRB3-202ENST00000311550 CC2D1AQ6P1N0 951 aaPredicted RBP18.82■□□□□ 0.6
GABRB3-202ENST00000311550 CCPG1Q9ULG6 757 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 RRP15Q9Y3B9 282 aaKnown RBP18.82■□□□□ 0.6
GABRB3-202ENST00000311550 LGALS16A8MUM7 142 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 NIM1KQ8IY84 436 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 PCIF1Q9H4Z3 704 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 AZI2Q9H6S1 392 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 USP17L5A8MUK1 530 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 POLD1P28340 1107 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 GCNT4Q9P109 453 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 LIG4P49917 911 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 C1orf112Q9NSG2 853 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 ADGRG1Q9Y653 693 aa18.82■□□□□ 0.6
GABRB3-202ENST00000311550 FDPSP14324 419 aaKnown RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 PSMC2P35998 433 aaKnown RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 E4F1Q66K89 784 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 SENP2Q9HC62 589 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 ARL1P40616 181 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 GRAPQ13588 217 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 TAB3Q8N5C8 712 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 GRAPLQ8TC17 118 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 WDR24Q96S15 920 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 ZNF577Q9BSK1 485 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 ADGRB1O14514 1584 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 N4BP1O75113 896 aaKnown RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 ANTXR2P58335 489 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 PDIA6Q15084 440 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 FEZ2Q9UHY8 353 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 PRPF6O94906 941 aaKnown RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 ATF7P17544 494 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 CFAP157Q5JU67 520 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 APBB1IPQ7Z5R6 666 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 MAIP1Q8WWC4 291 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 IRX2Q9BZI1 471 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 KANSL2Q9H9L4 492 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 FBXO2Q9UK22 296 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 HOXA13P31271 388 aaPredicted RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 RASA3Q14644 834 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 PPP2R5EQ16537 467 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 MAGOHBQ96A72 148 aaKnown RBP18.81■□□□□ 0.6
GABRB3-202ENST00000311550 SH3GLB2Q9NR46 395 aa18.81■□□□□ 0.6
GABRB3-202ENST00000311550 LMNB1P20700 586 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 RFX5P48382 616 aaPredicted RBP18.8■□□□□ 0.6
GABRB3-202ENST00000311550 CCDC89Q8N998 374 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 STMN2Q93045 179 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 EXOC4Q96A65 974 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 NRXN1Q9ULB1 1477 aa18.8■□□□□ 0.6
GABRB3-202ENST00000311550 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms