RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 USP17L17D6RBQ6 530 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 USP17L19D6RCP7 530 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 USP17L20D6RJB6 530 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 KRT14P02533 472 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 USP17L24Q0WX57 530 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 CEP85LQ5SZL2 805 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 RCSD1Q6JBY9 416 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 TTI2Q6NXR4 508 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 ELOA2Q8IYF1 753 aaPredicted RBP19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 ZSCAN5CA6NGD5 496 aaPredicted RBP19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 SLURP2P0DP57 97 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 ADAM9Q13443 819 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 MAN2A1Q16706 1144 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 WDR59Q6PJI9 974 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 OTUD6BQ8N6M0 293 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 AP1M1Q9BXS5 423 aa19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 DDX25Q9UHL0 483 aaKnown RBP19.19■□□□□ 0.66
CHRNA5-201ENST00000299565 SFI1A8K8P3 1242 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 DOK7Q18PE1 504 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 TBC1D10BQ4KMP7 808 aaPredicted RBP19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 MSANTD4Q8NCY6 345 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 ZNF384Q8TF68 577 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 OSBPL9Q96SU4 736 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 NKRFO15226 690 aaKnown RBP eCLIP19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 NPY5RQ15761 445 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 PRR16Q569H4 304 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 CCDC65Q8IXS2 484 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 BACH1O14867 736 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 EPHB6O15197 1021 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 RHOBTB3O94955 611 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 TCP1P17987 556 aaKnown RBP19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 PBX1P40424 430 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 TTBK2Q6IQ55 1244 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 TRAPPC11Q7Z392 1133 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 DPH5Q9H2P9 285 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 BCS1LQ9Y276 419 aa19.18■□□□□ 0.66
CHRNA5-201ENST00000299565 STXBP3O00186 592 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 HGSO14964 777 aaPredicted RBP19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 CLIC2O15247 247 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 PALMO75781 387 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 MRPL12P52815 198 aaKnown RBP19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 ASIC2Q16515 512 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 CCDC170Q8IYT3 715 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 RPGRIP1Q96KN7 1286 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 MAD2L2Q9UI95 211 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 HPCAL4Q9UM19 191 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 CETN3O15182 167 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 GRM4Q14833 912 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 PTF1AQ7RTS3 328 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 IFT20Q8IY31 132 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 PSTPIP2Q9H939 334 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 MKRN1Q9UHC7 482 aaKnown RBP19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 MAP2K7O14733 419 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 TRAPPC3LQ5T215 181 aa19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 DUSP9Q99956 384 aaKnown RBP19.17■□□□□ 0.66
CHRNA5-201ENST00000299565 TBCAO75347 108 aaKnown RBP19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 STAT3P40763 770 aa19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 VPS36Q86VN1 386 aa19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 LINC00116Q8NCU8 138 aa19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 GGA1Q9UJY5 639 aa19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 FAM184BQ9ULE4 1060 aa19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 PPFIA1Q13136 1202 aa19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 CCNI2Q6ZMN8 369 aaPredicted RBP19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 FBXO33Q7Z6M2 555 aa19.16■□□□□ 0.66
CHRNA5-201ENST00000299565 RPS6KA1Q15418 735 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 TMED8Q6PL24 325 aaPredicted RBP19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 HNRNPLLQ8WVV9 542 aaKnown RBP19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 NUDT12Q9BQG2 462 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 ZC3H12CQ9C0D7 883 aaKnown RBP19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 RBM12Q9NTZ6 932 aaKnown RBP19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 SNX12Q9UMY4 172 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 CHD2O14647 1828 aaKnown RBP19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 A0A1W2PQC6 194 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 PSMD14O00487 310 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 KRT13P13646 458 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 INPP5BP32019 993 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 UBXN2AP68543 259 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 ZYXQ15942 572 aaKnown RBP19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 CCSER1Q9C0I3 900 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 SEMA6BQ9H3T3 888 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 ARHGAP20Q9P2F6 1191 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 TCEAL9Q9UHQ7 104 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 E7EVH7 732 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 NR2F2P24468 414 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 ARHGAP44Q17R89 818 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 RETREG2Q8NC44 543 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 ZBTB21Q9ULJ3 1066 aa19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 PDS5AQ29RF7 1337 aaKnown RBP19.15■□□□□ 0.66
CHRNA5-201ENST00000299565 POTEB3A0JP26 581 aa19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 POTECB2RU33 542 aa19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 SLC37A4O43826 429 aa19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 GCNT3O95395 438 aa19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 RASA1P20936 1047 aa19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 FKBP3Q00688 224 aaKnown RBP19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 MEX3CQ5U5Q3 659 aaKnown RBP19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 POTEBQ6S5H4 581 aa19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 LRRC31Q6UY01 552 aa19.14■□□□□ 0.66
CHRNA5-201ENST00000299565 AK8Q96MA6 479 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms