RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TICAM2Q86XR7 235 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 COG1Q8WTW3 980 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 DHTKD1Q96HY7 919 aaPredicted RBP17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 ZNF512BQ96KM6 892 aaPredicted RBP17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 CAPS2Q9BXY5 557 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 PPP1R12BO60237 982 aaPredicted RBP17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 SPICE1Q8N0Z3 855 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 DYDC1Q8WWB3 177 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 SELENOSQ9BQE4 189 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 AP1M1Q9BXS5 423 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 BACH1O14867 736 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 MMP10P09238 476 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 SLC1A4P43007 532 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP14P54578 494 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 DDX12PQ92771 950 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 DDX25Q9UHL0 483 aaKnown RBP17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 SPDYE3A6NKU9 549 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L15C9J2P7 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L13C9JLJ4 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L11C9JVI0 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L18D6R9N7 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L22D6RA61 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L17D6RBQ6 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L19D6RCP7 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L20D6RJB6 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 GCNT3O95395 438 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 ALDH1B1P30837 517 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L24Q0WX57 530 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 ADAM9Q13443 819 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 NFIXQ14938 502 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 CDKAL1Q5VV42 579 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 USP17L6PQ6QN14 398 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 SLC51AQ86UW1 340 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 TRIM9Q9C026 710 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 COL5A2P05997 1499 aaPredicted RBP17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 E9PMD0 336 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 PDE6BP35913 854 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 TUBB4BP68371 445 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 APBA1Q02410 837 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 ARL6IP4Q66PJ3 421 aaKnown RBP17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 MED4Q9NPJ6 270 aa17.86■□□□□ 0.45
PDZRN3-201ENST00000263666 NPHP3-ACAD11A0A0J9YXS1 232 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 LINC00116Q8NCU8 138 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 THAP9Q9H5L6 903 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 MYO1AQ9UBC5 1043 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 PLCG2P16885 1265 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 GJC1P36383 396 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 U2AF1L4Q8WU68 220 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 PSTPIP2Q9H939 334 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 SEMA3EO15041 775 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 RPS6KA1Q15418 735 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 VWA3BQ502W6 1294 aa17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 FNBP4Q8N3X1 1017 aaPredicted RBP17.85■□□□□ 0.45
PDZRN3-201ENST00000263666 E7EVH7 732 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 PDXDC2PQ6P474 469 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 KIAA0825Q8IV33 1275 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 IFT20Q8IY31 132 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 INPP5BP32019 993 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 CEP57Q86XR8 500 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 LARGE2Q8N3Y3 721 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 USP40Q9NVE5 1235 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 STAT3P40763 770 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 IL17AQ16552 155 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 DAAM2Q86T65 1068 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 CAPN6Q9Y6Q1 641 aa17.84■□□□□ 0.45
PDZRN3-201ENST00000263666 MAN2A1Q16706 1144 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 TTBK2Q6IQ55 1244 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 HDAC9Q9UKV0 1011 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 L1RE1Q9UN81 338 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 FAM13AO94988 1023 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 CYP2J2P51589 502 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 TNNC1P63316 161 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 SP4Q02446 784 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 HDAC7Q8WUI4 952 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 EHD4Q9H223 541 aa17.83■□□□□ 0.45
PDZRN3-201ENST00000263666 SLURP2P0DP57 97 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 DGKHQ86XP1 1220 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 DMGDHQ9UI17 866 aaKnown RBP17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 CAPN11Q9UMQ6 739 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 TCP1P17987 556 aaKnown RBP17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 NR2F2P24468 414 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 HERVK_113P62684 666 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 PEX26Q7Z412 305 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 MTRQ99707 1265 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 LRRC27Q9C0I9 530 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 JRKLQ9Y4A0 524 aa17.83■□□□□ 0.44
PDZRN3-201ENST00000263666 PALMO75781 387 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 CFBP00751 764 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 CUL5Q93034 780 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 BARHL2Q9NY43 387 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 CAPN7Q9Y6W3 813 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 EIF3CLB5ME19 914 aaKnown RBP17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 C12orf60Q5U649 245 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 TPH2Q8IWU9 490 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 EIF3CQ99613 913 aaKnown RBP17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 PPFIA1Q13136 1202 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 PCDHA1Q9Y5I3 950 aa17.82■□□□□ 0.44
PDZRN3-201ENST00000263666 POTEB3A0JP26 581 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 MYMKA6NI61 221 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms