RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 VIPAS39Q9H9C1 493 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 ACTR5Q9H9F9 607 aaPredicted RBP14.61□□□□□ -0.07
CCDC117-201ENST00000249064 NFAT5O94916 1531 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 TXKP42681 527 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 EVX2Q03828 476 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 NTRK3Q16288 839 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 MUM1Q2TAK8 710 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 EARS2Q5JPH6 523 aaKnown RBP14.61□□□□□ -0.07
CCDC117-201ENST00000249064 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
CCDC117-201ENST00000249064 MARCH10Q8NA82 808 aaPredicted RBP14.61□□□□□ -0.07
CCDC117-201ENST00000249064 SLC44A5Q8NCS7 719 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 STAMBPL1Q96FJ0 436 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 NGLY1Q96IV0 654 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 TUBGCP2Q9BSJ2 902 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 SWAP70Q9UH65 585 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 SRP68Q9UHB9 627 aaKnown RBP14.61□□□□□ -0.07
CCDC117-201ENST00000249064 TUBE1Q9UJT0 475 aa14.61□□□□□ -0.07
CCDC117-201ENST00000249064 SGMS1Q86VZ5 419 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 USP17L3A6NCW0 530 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 USP17L4A6NCW7 530 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 RPS8P62241 208 aaKnown RBP14.6□□□□□ -0.07
CCDC117-201ENST00000249064 PARP10Q53GL7 1025 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 EMBQ6PCB8 327 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 INTS8Q75QN2 995 aaKnown RBP14.6□□□□□ -0.07
CCDC117-201ENST00000249064 USP17L1Q7RTZ2 530 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 FAM114A1Q8IWE2 563 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 RGS16O15492 202 aaPredicted RBP14.6□□□□□ -0.07
CCDC117-201ENST00000249064 CCNT1O60563 726 aaKnown RBP14.6□□□□□ -0.07
CCDC117-201ENST00000249064 SCG2P13521 617 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 MDH1P40925 334 aaKnown RBP14.6□□□□□ -0.07
CCDC117-201ENST00000249064 OTUD6AQ7L8S5 288 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 ADGRA1Q86SQ6 560 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 ZSCAN29Q8IWY8 852 aaPredicted RBP14.6□□□□□ -0.07
CCDC117-201ENST00000249064 MYCBPAPQ8TBZ2 947 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 CYFIP2Q96F07 1278 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 SGSM3Q96HU1 749 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 IFT74Q96LB3 600 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 MAP3K14Q99558 947 aa14.6□□□□□ -0.07
CCDC117-201ENST00000249064 NOP53Q9NZM5 478 aaKnown RBP14.6□□□□□ -0.07
CCDC117-201ENST00000249064 BMP6P22004 513 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 EIF4A3P38919 411 aaKnown RBP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 DHX9Q08211 1270 aaKnown RBP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 RPS6KA1Q15418 735 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 KCNV1Q6PIU1 500 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 LONP2Q86WA8 852 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 PNMA1Q8ND90 353 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 MDM1Q8TC05 714 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 SLC4A9Q96Q91 983 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 RNF26Q9BY78 433 aaPredicted RBP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 LACRTQ9GZZ8 138 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 NUCKS1Q9H1E3 243 aaKnown RBP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 AGPAT5Q9NUQ2 364 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 CRYBG1Q9Y4K1 1723 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 CETN3O15182 167 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 BMP15O95972 392 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 LDHBP07195 334 aaKnown RBP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 CALM1P0DP23 149 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 CALM2P0DP24 149 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 CALM3P0DP25 149 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 SNX1Q13596 522 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 SEPT14Q6ZU15 432 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 DDX42Q86XP3 938 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 RNF10Q8N5U6 811 aaKnown RBP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 TRIML1Q8N9V2 468 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 INTS9Q9NV88 658 aaKnown RBP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 TBC1D7Q9P0N9 293 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 TNNI2P48788 182 aa14.59□□□□□ -0.07
CCDC117-201ENST00000249064 RBM5P52756 815 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCDC117-201ENST00000249064 A0A1B0GTH6 734 aa14.58□□□□□ -0.07
CCDC117-201ENST00000249064 KRIT1O00522 736 aa14.58□□□□□ -0.07
CCDC117-201ENST00000249064 RIMBP2O15034 1052 aa14.58□□□□□ -0.07
CCDC117-201ENST00000249064 THEMIS2Q5TEJ8 643 aa14.58□□□□□ -0.07
CCDC117-201ENST00000249064 FERMT2Q96AC1 680 aa14.58□□□□□ -0.07
CCDC117-201ENST00000249064 GPCPD1Q9NPB8 672 aa14.58□□□□□ -0.07
CCDC117-201ENST00000249064 ADD3Q9UEY8 706 aaKnown RBP14.58□□□□□ -0.07
CCDC117-201ENST00000249064 CRYMQ14894 314 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 C8orf37Q96NL8 207 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 NOD2Q9HC29 1040 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 BIN2Q9UBW5 565 aaPredicted RBP14.58□□□□□ -0.08
CCDC117-201ENST00000249064 KLRK1P26718 216 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 CCNHP51946 323 aaPredicted RBP14.58□□□□□ -0.08
CCDC117-201ENST00000249064 ZNF131P52739 623 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 MECOMQ03112 1051 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 LRRC14Q15048 493 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 TCP11X2Q5H9J9 407 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 PARD3BQ8TEW8 1205 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 ZCWPW1Q9H0M4 648 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 TECP42680 631 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 PTGISQ16647 500 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 BLIDQ8IZY5 108 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 ATP6V1G3Q96LB4 118 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 OSBPL9Q96SU4 736 aa14.58□□□□□ -0.08
CCDC117-201ENST00000249064 RBM12Q9NTZ6 932 aaKnown RBP14.58□□□□□ -0.08
CCDC117-201ENST00000249064 TRAF5O00463 557 aa14.57□□□□□ -0.08
CCDC117-201ENST00000249064 RPN1P04843 607 aaKnown RBP14.57□□□□□ -0.08
CCDC117-201ENST00000249064 VEGFAP15692 232 aaPredicted RBP14.57□□□□□ -0.08
CCDC117-201ENST00000249064 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
CCDC117-201ENST00000249064 CALML3P27482 149 aa14.57□□□□□ -0.08
CCDC117-201ENST00000249064 DNM2P50570 870 aa14.57□□□□□ -0.08
CCDC117-201ENST00000249064 SMTNP53814 917 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms