RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 DACT1Q9NYF0 836 aa13.08□□□□□ -0.32
LINC00538-201ENST00000626109 ERICH4A6NGS2 130 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 ITGBL1O95965 494 aaPredicted RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 PRKG1Q13976 671 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 LMBRD2Q68DH5 695 aaPredicted RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 UBE2Q1Q7Z7E8 422 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 ATRIPQ8WXE1 791 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 BRF1Q92994 677 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 TMCC3Q9ULS5 477 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 PRKAB1Q9Y478 270 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 PABPN1LA6NDY0 278 aaKnown RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 A6NJY4 79 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 CTAGE5O15320 804 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 MYL1P05976 194 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 ZNF211Q13398 564 aaPredicted RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 RBM43Q6ZSC3 357 aaKnown RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 ARMC9Q7Z3E5 817 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 SMARCC2Q8TAQ2 1214 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 GOLGA1Q92805 767 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 WRNIP1Q96S55 665 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 DNAJC25Q9H1X3 360 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 SPTLC3Q9NUV7 552 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 FAM13BQ9NYF5 915 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 ODF2LQ9ULJ1 636 aa13.07□□□□□ -0.32
LINC00538-201ENST00000626109 ANGEL1Q9UNK9 670 aaKnown RBP13.07□□□□□ -0.32
LINC00538-201ENST00000626109 H3BRB1 525 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 TSPAN6O43657 245 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 CELF2O95319 508 aaKnown RBP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 GDF11O95390 407 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 ABL1P00519 1130 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 AKR1B1P15121 316 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 CASQ1P31415 396 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 TFAP4Q01664 338 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 RESTQ13127 1097 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 CAMK4Q16566 473 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 ABCB5Q2M3G0 1257 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 GRAMD1BQ3KR37 738 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 FAM47AQ5JRC9 791 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 MB21D2Q8IYB1 491 aaPredicted RBP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 KLRG1Q96E93 195 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 TUT1Q9H6E5 874 aaKnown RBP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 TTC12Q9H892 705 aaPredicted RBP13.06□□□□□ -0.32
LINC00538-201ENST00000626109 ZNF112Q9UJU3 913 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 MYH8P13535 1937 aa13.06□□□□□ -0.32
LINC00538-201ENST00000626109 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 CTNND1O60716 968 aaKnown RBP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 USP2O75604 605 aaPredicted RBP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 MYL3P08590 195 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 NOS2P35228 1153 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 CAP2P40123 477 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 FKBP1BP68106 108 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 FSTL1Q12841 308 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 TAF3Q5VWG9 929 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 ZNF274Q96GC6 653 aaPredicted RBP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 GBA2Q9HCG7 927 aaPredicted RBP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 GINM1Q9NU53 330 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 FZD1Q9UP38 647 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 INPP5FQ9Y2H2 1132 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 PLIN4Q96Q06 1357 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 PAPPA2Q9BXP8 1791 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 JAK2O60674 1132 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 INPP5BP32019 993 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 SEC13P55735 322 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 GEMIN4P57678 1058 aaKnown RBP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 SCRN1Q12765 414 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 SART3Q15020 963 aaKnown RBP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 ALKBH2Q6NS38 261 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 FAM173BQ6P4H8 233 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 TMEM179Q6ZVK1 233 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 C2orf69Q8N8R5 385 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 PAIP2Q9BPZ3 127 aaKnown RBP13.05□□□□□ -0.32
LINC00538-201ENST00000626109 UBAC1Q9BSL1 405 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 CENPOQ9BU64 300 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 KMT5AQ9NQR1 393 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 ACAD8Q9UKU7 415 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 ZBTB21Q9ULJ3 1066 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 CSADQ9Y600 493 aa13.05□□□□□ -0.32
LINC00538-201ENST00000626109 GPR37L1O60883 481 aa13.04□□□□□ -0.32
LINC00538-201ENST00000626109 GH2P01242 217 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms