RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TNFAIP2Q03169 654 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 FUT2Q10981 343 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 TOB2Q14106 344 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 BRDTQ58F21 947 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 HEATR3Q7Z4Q2 680 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 RAB11FIP4Q86YS3 637 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 CCDC82Q8N4S0 544 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 PCSK9Q8NBP7 692 aaKnown RBP16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 PIBF1Q8WXW3 757 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 PSTPIP2Q9H939 334 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 ASTN1O14525 1302 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 BRCA2P51587 3418 aa16.12■□□□□ 0.17
SNRPA1-216ENST00000626000 RBM47A0AV96 593 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 MOXD2PA6NHM9 499 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 OPLAHO14841 1288 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 PRPF3O43395 683 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 ZEB2O60315 1214 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 CST5P28325 142 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 CDC27P30260 824 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 NKX3-2P78367 333 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 TTLL4Q14679 1199 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 PFKFB3Q16875 520 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 GNPTABQ3T906 1256 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 NOL8Q76FK4 1167 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 CCDC148Q8NFR7 591 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 PAWRQ96IZ0 340 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 AP5M1Q9H0R1 490 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 UPF3AQ9H1J1 476 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 NR2E3Q9Y5X4 410 aa16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 V9GY48 417 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-216ENST00000626000 SPDYE3A6NKU9 549 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 FOSP01100 380 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 NR3C2P08235 984 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 COL6A1P12109 1028 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 SCG2P13521 617 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 CCND2P30279 289 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 RBM25P49756 843 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 NAPAP54920 295 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 GJA9P57773 515 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 LRRC41Q15345 812 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 DUSP28Q4G0W2 176 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 FBXO16Q8IX29 292 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 CMTR1Q8N1G2 835 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 TAAR1Q96RJ0 339 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 PDCD2LQ9BRP1 358 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 SEZ6LQ9BYH1 1024 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 SLKQ9H2G2 1235 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 GTF3C3Q9Y5Q9 886 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 FRMPD4Q14CM0 1322 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 SYNRGQ9UMZ2 1314 aa16.1■□□□□ 0.17
SNRPA1-216ENST00000626000 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 TGFB3P10600 412 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 GNA11P29992 359 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 ADCY7P51828 1080 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 NEK4P51957 841 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 AP3B2Q13367 1082 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 TAPT1Q6NXT6 567 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 WDR11Q9BZH6 1224 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 COL20A1Q9P218 1284 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
SNRPA1-216ENST00000626000 PDE4DIPQ5VU43 2346 aa16.08■□□□□ 0.17
SNRPA1-216ENST00000626000 KPNA6O60684 536 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 ADAMTS4O75173 837 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 CABYRO75952 493 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 SEC24BO95487 1268 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 C6orf222P0C671 652 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 EIF2AK2P19525 551 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 KCNA4P22459 653 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 HOXA13P31271 388 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 ADCYAP1R1P41586 468 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 CPT1AP50416 773 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 SSRP1Q08945 709 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 EEPD1Q7L9B9 569 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 VSIG10LQ86VR7 867 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 FCHSD1Q86WN1 690 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 PURBQ96QR8 312 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 C6orf50Q9HD87 102 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 SH3GLB2Q9NR46 395 aa16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-216ENST00000626000 KIAA1217Q5T5P2 1943 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 PFKFB2O60825 505 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 DEXIO95424 95 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 PGK1P00558 417 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 XBP1P17861 261 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 AK2P54819 239 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 CCT2P78371 535 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 PGM5Q15124 567 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms