RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 EHBP1Q8NDI1 1231 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 RGL2O15211 777 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 RFC4P35249 363 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 GPSM2P81274 684 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 GRB10Q13322 594 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 SPA17Q15506 151 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 CALCRLQ16602 461 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 C2CD5Q86YS7 1000 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 ZSCAN29Q8IWY8 852 aaPredicted RBP13.14□□□□□ -0.31
C11orf54-215ENST00000617482 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 MMRN2Q9H8L6 949 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 BLOC1S4Q9NUP1 217 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 SLC37A4O43826 429 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 CAPN2P17655 700 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
C11orf54-215ENST00000617482 CENPPQ6IPU0 288 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 ZNF662Q6ZS27 426 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 POTEMA6NI47 508 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 UFL1O94874 794 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 TDP2O95551 362 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 VWA3BQ502W6 1294 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 GSPT2Q8IYD1 628 aaKnown RBP13.13□□□□□ -0.31
C11orf54-215ENST00000617482 MTMR9Q96QG7 549 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 NDST4Q9H3R1 872 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 SNED1Q8TER0 1413 aa13.13□□□□□ -0.31
C11orf54-215ENST00000617482 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 VAV2P52735 878 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 C2orf54Q08AI8 447 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 LRRC41Q15345 812 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 MSL3Q8N5Y2 521 aaKnown RBP13.12□□□□□ -0.31
C11orf54-215ENST00000617482 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 GLIS3Q8NEA6 775 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 IFIH1Q9BYX4 1025 aaKnown RBP13.12□□□□□ -0.31
C11orf54-215ENST00000617482 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 A0A1W2PQJ5 194 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 PPP1R2P41236 205 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 IRX5P78411 483 aaPredicted RBP13.12□□□□□ -0.31
C11orf54-215ENST00000617482 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
C11orf54-215ENST00000617482 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 CLEC10AQ8IUN9 316 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 LRRC47Q8N1G4 583 aaKnown RBP13.12□□□□□ -0.31
C11orf54-215ENST00000617482 LARP4BQ92615 738 aaKnown RBP13.12□□□□□ -0.31
C11orf54-215ENST00000617482 GJA10Q969M2 543 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 DEF6Q9H4E7 631 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 PLAGL2Q9UPG8 496 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 PCDHA13Q9Y5I0 950 aa13.12□□□□□ -0.31
C11orf54-215ENST00000617482 EDIL3O43854 480 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 MYBL2P10244 700 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 PDHBP11177 359 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 ACTN2P35609 894 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 EIF4A3P38919 411 aaKnown RBP13.11□□□□□ -0.31
C11orf54-215ENST00000617482 RHBDL3P58872 404 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 MUM1L1Q5H9M0 696 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 FIGNQ5HY92 759 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 RRAGAQ7L523 313 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 FAM71BQ8TC56 605 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 PURBQ96QR8 312 aaKnown RBP13.11□□□□□ -0.31
C11orf54-215ENST00000617482 PSMB7Q99436 277 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 SIK3Q9Y2K2 1263 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 CAPN6Q9Y6Q1 641 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 MOCS3O95396 460 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 KIF11P52732 1056 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 MRPS25P82663 173 aaKnown RBP13.11□□□□□ -0.31
C11orf54-215ENST00000617482 CDK17Q00537 523 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 PICALMQ13492 652 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 KCNK18Q7Z418 384 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 GOLGA5Q8TBA6 731 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 SNX29Q8TEQ0 813 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 RIN2Q8WYP3 895 aaPredicted RBP13.11□□□□□ -0.31
C11orf54-215ENST00000617482 DDX12PQ92771 950 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
C11orf54-215ENST00000617482 ACBD3Q9H3P7 528 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 RIOX1Q9H6W3 641 aa13.11□□□□□ -0.31
C11orf54-215ENST00000617482 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 AKR1B10O60218 316 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 USO1O60763 962 aaKnown RBP13.1□□□□□ -0.31
C11orf54-215ENST00000617482 MCM3P25205 808 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 CXCR5P32302 372 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 TNNI2P48788 182 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 ADCY7P51828 1080 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 TMEM266Q2M3C6 531 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 MAP9Q49MG5 647 aa13.1□□□□□ -0.31
C11orf54-215ENST00000617482 COG1Q8WTW3 980 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms