RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
VPS25-205ENST00000590339 ATP2B1P20020 1258 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 GNA11P29992 359 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 GCLCP48506 637 aaPredicted RBP10.69□□□□□ -0.7
VPS25-205ENST00000590339 PTGDRQ13258 359 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 IQCB1Q15051 598 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 ZNF174Q15697 407 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 SLFN13Q68D06 897 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 BTNL9Q6UXG8 535 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 COA7Q96BR5 231 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 SDF4Q9BRK5 362 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 PAGR1Q9BTK6 254 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 DNAJC25Q9H1X3 360 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 USP25Q9UHP3 1055 aa10.69□□□□□ -0.7
VPS25-205ENST00000590339 RBBP6Q7Z6E9 1792 aaKnown RBP10.69□□□□□ -0.7
VPS25-205ENST00000590339 PARP14Q460N5 1801 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 SMCO2A6NFE2 343 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 AP5Z1O43299 807 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 ADCY3O60266 1144 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 NDUFB10O96000 172 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 ELNP15502 786 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 HOXA7P31268 230 aaPredicted RBP10.68□□□□□ -0.7
VPS25-205ENST00000590339 PRPHP41219 470 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 CLK2P49760 499 aaKnown RBP10.68□□□□□ -0.7
VPS25-205ENST00000590339 ZNF165P49910 485 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 ADCY7P51828 1080 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 HERVK_113P62684 666 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 MDM2Q00987 491 aaPredicted RBP10.68□□□□□ -0.7
VPS25-205ENST00000590339 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 NONOQ15233 471 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS25-205ENST00000590339 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 INF2Q27J81 1249 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 Q3C1V9 767 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 LONRF3Q496Y0 759 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 HS1BP3Q53T59 392 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 USP49Q70CQ1 688 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 KCTD1Q719H9 257 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 REXO1Q8N1G1 1221 aaKnown RBP10.68□□□□□ -0.7
VPS25-205ENST00000590339 GPRC5AQ8NFJ5 357 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 BPIFA3Q9BQP9 254 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 TXNRD2Q9NNW7 524 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 RIC8AQ9NPQ8 531 aa10.68□□□□□ -0.7
VPS25-205ENST00000590339 A0A087X0B3 334 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 A0A1W2PRG0 241 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L15C9J2P7 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L13C9JLJ4 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L11C9JVI0 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L18D6R9N7 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L22D6RA61 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L17D6RBQ6 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L19D6RCP7 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L20D6RJB6 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 F5H6K3 240 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 LAD1O00515 517 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 MCM7P33993 719 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 LONP1P36776 959 aaKnown RBP10.67□□□□□ -0.7
VPS25-205ENST00000590339 SLC1A4P43007 532 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP14P54578 494 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 NLRP12P59046 1061 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 UBXN2AP68543 259 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 KLRC3Q07444 240 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 USP17L24Q0WX57 530 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 E2F4Q16254 413 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 IL17AQ16552 155 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 SPECC1Q5M775 1068 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 NT5DC1Q5TFE4 455 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 SH3RF1Q7Z6J0 888 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 LUZP1Q86V48 1076 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 CEP57L1Q8IYX8 460 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 SYMPKQ92797 1274 aaKnown RBP10.67□□□□□ -0.7
VPS25-205ENST00000590339 KIAA1683Q9H0B3 1180 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 RNF208Q9H0X6 261 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 RBPJLQ9UBG7 517 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 TMX2Q9Y320 296 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 PHIPQ8WWQ0 1821 aa10.67□□□□□ -0.7
VPS25-205ENST00000590339 RAD21O60216 631 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 CCL5P13501 91 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 VCAM1P19320 739 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 CYP2B6P20813 491 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 SLC16A2P36021 539 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 CDC37Q16543 378 aaPredicted RBP10.66□□□□□ -0.7
VPS25-205ENST00000590339 QRICH1Q2TAL8 776 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 DPCR1Q3MIW9 517 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
VPS25-205ENST00000590339 SARM1Q6SZW1 724 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 CATSPERGQ6ZRH7 1159 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 NEK8Q86SG6 692 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 DHX40Q8IX18 779 aaKnown RBP10.66□□□□□ -0.7
VPS25-205ENST00000590339 SLAIN1Q8ND83 568 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 CNNM3Q8NE01 707 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 SPATA20Q8TB22 786 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 ERCC4Q92889 916 aaPredicted RBP10.66□□□□□ -0.7
VPS25-205ENST00000590339 TMEM60Q9H2L4 133 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 RPAP3Q9H6T3 665 aaPredicted RBP10.66□□□□□ -0.7
VPS25-205ENST00000590339 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 SERTAD1Q9UHV2 236 aa10.66□□□□□ -0.7
VPS25-205ENST00000590339 A0A087WWV3 80 aa10.65□□□□□ -0.7
VPS25-205ENST00000590339 VWA3AA6NCI4 1184 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms