RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 PLCG1P19174 1290 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 SREBF1P36956 1147 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
VPS25-203ENST00000589520 UBE2SQ16763 222 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 CDKAL1Q5VV42 579 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 HAUS3Q68CZ6 603 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 ADSSL1Q8N142 457 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 DNAJC5GQ8N7S2 189 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 ERMNQ8TAM6 284 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 MMTAG2Q9BU76 263 aaKnown RBP11.66□□□□□ -0.54
VPS25-203ENST00000589520 TRIM9Q9C026 710 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 DEFB129Q9H1M3 183 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 BLZF1Q9H2G9 400 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 RANBP17Q9H2T7 1088 aaKnown RBP11.66□□□□□ -0.54
VPS25-203ENST00000589520 KCNMB3Q9NPA1 279 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 ADAMTSL1Q8N6G6 1762 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 MYH4Q9Y623 1939 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 NFKBIEO00221 500 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 SLC37A4O43826 429 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 EDIL3O43854 480 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 KLRC4O43908 158 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 TDP2O95551 362 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.54
VPS25-203ENST00000589520 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
VPS25-203ENST00000589520 CDC25AP30304 524 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 USP14P54578 494 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 JAG1P78504 1218 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 RASA3Q14644 834 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 KMT5BQ4FZB7 885 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 TMEM119Q4V9L6 283 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 UNC13DQ70J99 1090 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 FAM114A1Q8IWE2 563 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 SNX29Q8TEQ0 813 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 NELFBQ8WX92 580 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 CRYGNQ8WXF5 182 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.54
VPS25-203ENST00000589520 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 MAF1Q9H063 256 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 THAP9Q9H5L6 903 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 EXOC1Q9NV70 894 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 LIMA1Q9UHB6 759 aaKnown RBP11.65□□□□□ -0.54
VPS25-203ENST00000589520 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
VPS25-203ENST00000589520 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS25-203ENST00000589520 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 PP2D1A8MPX8 630 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 GCOM1H8Y6P7 765 aaPredicted RBP11.64□□□□□ -0.55
VPS25-203ENST00000589520 WDR46O15213 610 aaKnown RBP11.64□□□□□ -0.55
VPS25-203ENST00000589520 KIF20AO95235 890 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 TPM1P09493 284 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 POLR2MP0CAP2 368 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 SLURP2P0DP57 97 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 MUTP22033 750 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 EEF1GP26641 437 aaKnown RBP11.64□□□□□ -0.55
VPS25-203ENST00000589520 PRCPP42785 496 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 PDE4DQ08499 809 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 GRB10Q13322 594 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 TRIM14Q14142 442 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 KLHL10Q6JEL2 608 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 USP17L6PQ6QN14 398 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 MCF2L2Q86YR7 1114 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 RAD54LQ92698 747 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 STAMQ92783 540 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 HAS1Q92839 578 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
VPS25-203ENST00000589520 GPBP1L1Q9HC44 474 aaPredicted RBP11.64□□□□□ -0.55
VPS25-203ENST00000589520 SAMSN1Q9NSI8 373 aaKnown RBP11.64□□□□□ -0.55
VPS25-203ENST00000589520 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 PPP2R3BQ9Y5P8 575 aa11.64□□□□□ -0.55
VPS25-203ENST00000589520 PHF20L1A8MW92 1017 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 CCNE1P24864 410 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 CASP1P29466 404 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 ECE1P42892 770 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 ASIC1P78348 528 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 CCZ1BP86790 482 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 CCZ1P86791 482 aaPredicted RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 LRMPQ12912 555 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 TBX2Q13207 712 aaPredicted RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 MIGA2Q7L4E1 593 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 APOBEC3FQ8IUX4 373 aaKnown RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 PRPF38AQ8NAV1 312 aaKnown RBP11.63□□□□□ -0.55
VPS25-203ENST00000589520 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
VPS25-203ENST00000589520 IQCDQ96DY2 449 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms