RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 LTBP2Q14767 1821 aa27.07■■□□□ 1.92
LSM7-204ENST00000587502 CDC45O75419 566 aa27.07■■□□□ 1.92
LSM7-204ENST00000587502 GHRHRQ02643 423 aa27.07■■□□□ 1.92
LSM7-204ENST00000587502 CXCL17Q6UXB2 119 aa27.07■■□□□ 1.92
LSM7-204ENST00000587502 CTCFLQ8NI51 663 aaPredicted RBP27.07■■□□□ 1.92
LSM7-204ENST00000587502 TAAR1Q96RJ0 339 aa27.07■■□□□ 1.92
LSM7-204ENST00000587502 PNMA6FA0A0J9YX94 578 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 SOX1O00570 391 aaPredicted RBP27.06■■□□□ 1.92
LSM7-204ENST00000587502 CFBP00751 764 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 GNAQP50148 359 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 HSD17B4P51659 736 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 TTLL4Q14679 1199 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 STXBP2Q15833 593 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 ARHGEF16Q5VV41 709 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 NFXL1Q6ZNB6 911 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 HOMER1Q86YM7 354 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 ZNF654Q8IZM8 581 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 LZTS2Q9BRK4 669 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 POLR3EQ9NVU0 708 aa27.06■■□□□ 1.92
LSM7-204ENST00000587502 CCDC69A6NI79 296 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 CALM1P0DP23 149 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 CALM2P0DP24 149 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 CALM3P0DP25 149 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 SMARCA1P28370 1054 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 LIFRP42702 1097 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 SLC43A3Q8NBI5 491 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 OR6J1Q8NGC5 347 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 PIGSQ96S52 555 aa27.05■■□□□ 1.92
LSM7-204ENST00000587502 SH2B2O14492 632 aaPredicted RBP27.04■■□□□ 1.92
LSM7-204ENST00000587502 PPP1R11O60927 126 aaPredicted RBP27.04■■□□□ 1.92
LSM7-204ENST00000587502 TXNP10599 105 aaKnown RBP27.04■■□□□ 1.92
LSM7-204ENST00000587502 ITGA7Q13683 1181 aa27.04■■□□□ 1.92
LSM7-204ENST00000587502 TMEM63BQ5T3F8 832 aa27.04■■□□□ 1.92
LSM7-204ENST00000587502 LRCH3Q96II8 777 aa27.04■■□□□ 1.92
LSM7-204ENST00000587502 GPHNQ9NQX3 736 aaPredicted RBP27.04■■□□□ 1.92
LSM7-204ENST00000587502 COL20A1Q9P218 1284 aa27.04■■□□□ 1.92
LSM7-204ENST00000587502 CYTH3O43739 400 aa27.03■■□□□ 1.92
LSM7-204ENST00000587502 KPNA6O60684 536 aa27.03■■□□□ 1.92
LSM7-204ENST00000587502 EIF3JO75822 258 aaKnown RBP27.03■■□□□ 1.92
LSM7-204ENST00000587502 TIMP1P01033 207 aa27.03■■□□□ 1.92
LSM7-204ENST00000587502 FAM126BQ8IXS8 530 aa27.03■■□□□ 1.92
LSM7-204ENST00000587502 SPZ1Q9BXG8 430 aa27.03■■□□□ 1.92
LSM7-204ENST00000587502 TBX21Q9UL17 535 aa27.03■■□□□ 1.92
LSM7-204ENST00000587502 OPLAHO14841 1288 aa27.02■■□□□ 1.92
LSM7-204ENST00000587502 SLC35G1Q2M3R5 365 aa27.02■■□□□ 1.92
LSM7-204ENST00000587502 PXMP2Q9NR77 195 aa27.02■■□□□ 1.92
LSM7-204ENST00000587502 BAZ2BQ9UIF8 2168 aaKnown RBP27.01■■□□□ 1.91
LSM7-204ENST00000587502 GCOM1H8Y6P7 765 aaPredicted RBP27.01■■□□□ 1.91
LSM7-204ENST00000587502 NR3C2P08235 984 aa27.01■■□□□ 1.91
LSM7-204ENST00000587502 POLR2MP0CAP2 368 aa27.01■■□□□ 1.91
LSM7-204ENST00000587502 EIF2AK2P19525 551 aaKnown RBP27.01■■□□□ 1.91
LSM7-204ENST00000587502 PTGS1P23219 599 aa27.01■■□□□ 1.91
LSM7-204ENST00000587502 ITGB8P26012 769 aa27.01■■□□□ 1.91
LSM7-204ENST00000587502 FPGSQ05932 587 aa27.01■■□□□ 1.91
LSM7-204ENST00000587502 RRP36Q96EU6 259 aaKnown RBP27.01■■□□□ 1.91
LSM7-204ENST00000587502 A6NJR5 290 aa27■■□□□ 1.91
LSM7-204ENST00000587502 KRT32Q14532 448 aa27■■□□□ 1.91
LSM7-204ENST00000587502 TSGA10IPQ3SY00 556 aa27■■□□□ 1.91
LSM7-204ENST00000587502 CCDC62Q6P9F0 684 aa27■■□□□ 1.91
LSM7-204ENST00000587502 SEPT14Q6ZU15 432 aa27■■□□□ 1.91
LSM7-204ENST00000587502 NEK1Q96PY6 1258 aa27■■□□□ 1.91
LSM7-204ENST00000587502 SEC63Q9UGP8 760 aaKnown RBP27■■□□□ 1.91
LSM7-204ENST00000587502 SLC12A7Q9Y666 1083 aa27■■□□□ 1.91
LSM7-204ENST00000587502 CD4P01730 458 aa26.99■■□□□ 1.91
LSM7-204ENST00000587502 PURAQ00577 322 aaKnown RBP26.99■■□□□ 1.91
LSM7-204ENST00000587502 SHHQ15465 462 aa26.99■■□□□ 1.91
LSM7-204ENST00000587502 MFSD5Q6N075 450 aa26.99■■□□□ 1.91
LSM7-204ENST00000587502 SYNE3Q6ZMZ3 975 aa26.99■■□□□ 1.91
LSM7-204ENST00000587502 MTG1Q9BT17 334 aaPredicted RBP26.99■■□□□ 1.91
LSM7-204ENST00000587502 MYL10Q9BUA6 226 aa26.99■■□□□ 1.91
LSM7-204ENST00000587502 MYL3P08590 195 aa26.98■■□□□ 1.91
LSM7-204ENST00000587502 KCNV1Q6PIU1 500 aa26.98■■□□□ 1.91
LSM7-204ENST00000587502 SGMS1Q86VZ5 419 aa26.98■■□□□ 1.91
LSM7-204ENST00000587502 PDCD2LQ9BRP1 358 aa26.98■■□□□ 1.91
LSM7-204ENST00000587502 GRIN2DO15399 1336 aa26.97■■□□□ 1.91
LSM7-204ENST00000587502 ARIH2O95376 493 aa26.97■■□□□ 1.91
LSM7-204ENST00000587502 GH1P01241 217 aa26.97■■□□□ 1.91
LSM7-204ENST00000587502 TMEM199Q8N511 208 aa26.97■■□□□ 1.91
LSM7-204ENST00000587502 COPS5Q92905 334 aa26.97■■□□□ 1.91
LSM7-204ENST00000587502 HMGB1P09429 215 aaKnown RBP26.96■■□□□ 1.91
LSM7-204ENST00000587502 HOXA13P31271 388 aaPredicted RBP26.96■■□□□ 1.91
LSM7-204ENST00000587502 PSMC6P62333 389 aa26.96■■□□□ 1.91
LSM7-204ENST00000587502 PPIGQ13427 754 aaKnown RBP eCLIP26.96■■□□□ 1.917e-10■□□□□ 8.5
LSM7-204ENST00000587502 DHX32Q7L7V1 743 aaKnown RBP26.96■■□□□ 1.91
LSM7-204ENST00000587502 SUPT20HL2P0C7V6 817 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 LY6KQ17RY6 165 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 C9orf50Q5SZB4 431 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 VSIG10LQ86VR7 867 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 FANCBQ8NB91 859 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 PIBF1Q8WXW3 757 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 LRRC2Q9BYS8 371 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 DDX41Q9UJV9 622 aaKnown RBP26.95■■□□□ 1.9
LSM7-204ENST00000587502 MRVI1Q9Y6F6 885 aa26.95■■□□□ 1.9
LSM7-204ENST00000587502 KIAA1217Q5T5P2 1943 aa26.94■■□□□ 1.9
LSM7-204ENST00000587502 LAMA2P24043 3122 aaKnown RBP26.94■■□□□ 1.9
LSM7-204ENST00000587502 MYCLP12524 364 aaPredicted RBP26.94■■□□□ 1.9
LSM7-204ENST00000587502 CCND2P30279 289 aa26.94■■□□□ 1.9
LSM7-204ENST00000587502 PGM5Q15124 567 aa26.94■■□□□ 1.9
LSM7-204ENST00000587502 FCHSD1Q86WN1 690 aa26.94■■□□□ 1.9
LSM7-204ENST00000587502 SRBD1Q8N5C6 995 aaKnown RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms