RNA–Protein interactions for RNA: ENST00000587127.1

UBE2O-204, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene UBE2O, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-204ENST00000587127 CCSER1Q9C0I3 900 aa12.05□□□□□ -0.48
UBE2O-204ENST00000587127 FAM107BQ9H098 131 aa12.05□□□□□ -0.48
UBE2O-204ENST00000587127 NLRC4Q9NPP4 1024 aa12.05□□□□□ -0.48
UBE2O-204ENST00000587127 NUP98P52948 1817 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 FTCDO95954 541 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 TECP42680 631 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 ENOX2Q16206 610 aaKnown RBP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 BRINP3Q76B58 766 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 NOC3LQ8WTT2 800 aaKnown RBP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 NDST4Q9H3R1 872 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 KANSL2Q9H9L4 492 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 PLCH1Q4KWH8 1693 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 TCP1P17987 556 aaKnown RBP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 PRDX5P30044 214 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 TFAP4Q01664 338 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 MECOMQ03112 1051 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 LRRC41Q15345 812 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 PTPROQ16827 1216 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 GBP6Q6ZN66 633 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 PNMA1Q8ND90 353 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 YY1AP1Q9H869 796 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 ZNF804BA4D1E1 1349 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 BICDL2A1A5D9 508 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 HEXIM1O94992 359 aaKnown RBP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 PAFAH1B1P43034 410 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 VWA3BQ502W6 1294 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 EMBQ6PCB8 327 aa12.04□□□□□ -0.48
UBE2O-204ENST00000587127 ZNF572Q7Z3I7 529 aaPredicted RBP12.04□□□□□ -0.48
UBE2O-204ENST00000587127 A0A1W2PQJ5 194 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 ORC4O43929 436 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 SKOR1P84550 965 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 CDK17Q00537 523 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 TDRD12Q587J7 1177 aaKnown RBP12.03□□□□□ -0.48
UBE2O-204ENST00000587127 PIK3R5Q8WYR1 880 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 NSUN4Q96CB9 384 aaKnown RBP12.03□□□□□ -0.48
UBE2O-204ENST00000587127 FAM84BQ96KN1 310 aaPredicted RBP12.03□□□□□ -0.48
UBE2O-204ENST00000587127 ALS2CR12Q96Q35 445 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 TFCP2L1Q9NZI6 479 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 ARAP2Q8WZ64 1704 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
UBE2O-204ENST00000587127 CFAP58Q5T655 872 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 DNAAF5Q86Y56 855 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 BAP1Q92560 729 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 KRT12Q99456 494 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 NCAPGQ9BPX3 1015 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 MCM9Q9NXL9 1143 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
UBE2O-204ENST00000587127 KIF5BP33176 963 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 LSP1P33241 339 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 ALS2CLQ60I27 953 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 IQCKQ8N0W5 287 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 CAVIN3Q969G5 261 aa12.03□□□□□ -0.48
UBE2O-204ENST00000587127 MMTAG2Q9BU76 263 aaKnown RBP12.03□□□□□ -0.48
UBE2O-204ENST00000587127 GEMIN8Q9NWZ8 242 aaKnown RBP12.03□□□□□ -0.48
UBE2O-204ENST00000587127 CACNA1SQ13698 1873 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 PRLRP16471 622 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.48
UBE2O-204ENST00000587127 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.48
UBE2O-204ENST00000587127 OTUD6BQ8N6M0 293 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 CASKIN2Q8WXE0 1202 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 TANGO6Q9C0B7 1094 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 CENPHQ9H3R5 247 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.48
UBE2O-204ENST00000587127 H0YHG0 523 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 FNTAP49354 379 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.49
UBE2O-204ENST00000587127 ARID5AQ03989 594 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 ITIH3Q06033 890 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 NAA35Q5VZE5 725 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 GOLPH3Q9H4A6 298 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 MYMKA6NI61 221 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 STXBP3O00186 592 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 BACH1O14867 736 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 PALMO75781 387 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 NTSR2O95665 410 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 OR52Z1P0C646 297 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 C7orf25Q9BPX7 421 aa12.02□□□□□ -0.49
UBE2O-204ENST00000587127 HPDP32754 393 aaPredicted RBP12.01□□□□□ -0.49
UBE2O-204ENST00000587127 RNF187Q5TA31 235 aaPredicted RBP12.01□□□□□ -0.49
UBE2O-204ENST00000587127 CENPPQ6IPU0 288 aa12.01□□□□□ -0.49
UBE2O-204ENST00000587127 CACNA2D4Q7Z3S7 1137 aa12.01□□□□□ -0.49
UBE2O-204ENST00000587127 OR2W6PQ8NHA6 318 aa12.01□□□□□ -0.49
UBE2O-204ENST00000587127 CCDC47Q96A33 483 aaKnown RBP12.01□□□□□ -0.49
UBE2O-204ENST00000587127 LCA5LO95447 670 aa12.01□□□□□ -0.49
UBE2O-204ENST00000587127 TXKP42681 527 aa12.01□□□□□ -0.49
UBE2O-204ENST00000587127 ASTE1Q2TB18 679 aaPredicted RBP12.01□□□□□ -0.49
UBE2O-204ENST00000587127 HGSNATQ68CP4 663 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms