RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 LMAN1P49257 510 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 TUBB2AQ13885 445 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 TMEM266Q2M3C6 531 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 SV2BQ7L1I2 683 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 FAM114A1Q8IWE2 563 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 EXOC4Q96A65 974 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 CNOT6LQ96LI5 555 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 TUBB2BQ9BVA1 445 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 ZC3H12CQ9C0D7 883 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 ADAM21Q9UKJ8 722 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 FXR2P51116 673 aaKnown RBP eCLIP14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 GRB10Q13322 594 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 CEP112Q8N8E3 955 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 NAPGQ99747 312 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 PARD6BQ9BYG5 372 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 USP40Q9NVE5 1235 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 PSD3Q9NYI0 1048 aa14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 PUF60Q9UHX1 559 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-222ENST00000584377 TRIM21P19474 475 aaKnown RBP14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 ZNF543Q08ER8 600 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 TBC1D8BQ0IIM8 1120 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 KIAA0895Q8NCT3 520 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 HPS3Q969F9 1004 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 CDK5RAP3Q96JB5 506 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 RAB34Q9BZG1 259 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 STK17AQ9UEE5 414 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 SWAP70Q9UH65 585 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 TRPC5Q9UL62 973 aaPredicted RBP14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 PNMA6FA0A0J9YX94 578 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 ACTN2P35609 894 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 MTIF2P46199 727 aaKnown RBP14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 TNNI2P48788 182 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 CC2D1AQ6P1N0 951 aaPredicted RBP14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 MXD3Q9BW11 206 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 JMJD4Q9H9V9 463 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 BLOC1S4Q9NUP1 217 aa14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 REXO2Q9Y3B8 237 aaKnown RBP14.74□□□□□ -0.05
CSNK1D-222ENST00000584377 LTBP1Q14766 1721 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 SCNN1DP51172 638 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 MCM6Q14566 821 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 TTC31Q49AM3 519 aaPredicted RBP14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 WDR59Q6PJI9 974 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 PACS2Q86VP3 889 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 ADGRF4Q8IZF3 695 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 SLC39A2Q9NP94 309 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 FOCADQ5VW36 1801 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 POTEMA6NI47 508 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 EDIL3O43854 480 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 COBLL1Q53SF7 1204 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 RETREG2Q8NC44 543 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 PNMA5Q96PV4 448 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 NOC4LQ9BVI4 516 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 NUP58Q9BVL2 599 aa14.73□□□□□ -0.05
CSNK1D-222ENST00000584377 LRRC37AA6NMS7 1700 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 MYMKA6NI61 221 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 SHMT1P34896 483 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 ATP2B2Q01814 1243 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 DOK7Q18PE1 504 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 PPP1R18Q6NYC8 613 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 PCMTD1Q96MG8 357 aaPredicted RBP14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 TTYH3Q9C0H2 523 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 ARFGAP3Q9NP61 516 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 RIC8AQ9NPQ8 531 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 AGPAT5Q9NUQ2 364 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 GUCA1BQ9UMX6 200 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 MPHOSPH10O00566 681 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 PPP1R11O60927 126 aaPredicted RBP14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 KLK7P49862 253 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 PDIA5Q14554 519 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 UBE2SQ16763 222 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 CCDC96Q2M329 555 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 KRT79Q5XKE5 535 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 TTBK2Q6IQ55 1244 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 UNC13DQ70J99 1090 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 SNX29Q8TEQ0 813 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 DRC1Q96MC2 740 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 SEMA6BQ9H3T3 888 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 MYO3BQ8WXR4 1341 aa14.72□□□□□ -0.05
CSNK1D-222ENST00000584377 PVALEFA0A1B0GWK0 134 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 TRIM37O94972 964 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 MAGEA9P43362 315 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 MEA1Q16626 185 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 MIIPQ5JXC2 388 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 CENPPQ6IPU0 288 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 CDC42EP5Q6NZY7 148 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 DYMQ7RTS9 669 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 HAUS4Q9H6D7 363 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 ZNHIT6Q9NWK9 470 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 TRIM10Q9UDY6 481 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 HLA-DOAP06340 250 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 SLC16A2P36021 539 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 GPATCH4Q5T3I0 446 aaKnown RBP14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 ZSCAN29Q8IWY8 852 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 CUL5Q93034 780 aa14.71□□□□□ -0.05
CSNK1D-222ENST00000584377 RASSF10A6NK89 507 aa14.71□□□□□ -0.06
CSNK1D-222ENST00000584377 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.06
CSNK1D-222ENST00000584377 ZBED6P86452 979 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms