RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 USP17L19D6RCP7 530 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 USP17L20D6RJB6 530 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 POLR2DO15514 142 aaKnown RBP7.09□□□□□ -1.27
CHD9-217ENST00000565832 CUTAO60888 179 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 CCDC192P0DO97 292 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 CAP2P40123 477 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 SYKP43405 635 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 USP17L24Q0WX57 530 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 IKQ13123 557 aaPredicted RBP7.09□□□□□ -1.27
CHD9-217ENST00000565832 PRKG1Q13976 671 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 QRICH1Q2TAL8 776 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 KIF4BQ2VIQ3 1234 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 USP17L6PQ6QN14 398 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 RBM43Q6ZSC3 357 aaKnown RBP7.09□□□□□ -1.27
CHD9-217ENST00000565832 FAM83AQ86UY5 434 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 C4orf32Q8N8J7 132 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 DPF2Q92785 391 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 GLMNQ92990 594 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 GJA10Q969M2 543 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 DNAJC25Q9H1X3 360 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 TMEM60Q9H2L4 133 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 ZBTB21Q9ULJ3 1066 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 SRPRBQ9Y5M8 271 aaKnown RBP7.09□□□□□ -1.27
CHD9-217ENST00000565832 LTBP3Q9NS15 1303 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 SBF1O95248 1867 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 CCDC194A0A1B0GVG4 234 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 ZBTB5O15062 677 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 LMNB1P20700 586 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 CALML3P27482 149 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 SMARCA1P28370 1054 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 CASP1P29466 404 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 INPP5BP32019 993 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 PNOCQ13519 176 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 LETM2Q2VYF4 491 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 USH1GQ495M9 461 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 FAM83BQ5T0W9 1011 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 GPATCH4Q5T3I0 446 aaKnown RBP7.09□□□□□ -1.27
CHD9-217ENST00000565832 FKBP1CQ5VVH2 108 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 SASS6Q6UVJ0 657 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 C11orf57Q6ZUT1 292 aaPredicted RBP7.09□□□□□ -1.27
CHD9-217ENST00000565832 JMYQ8N9B5 988 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 ZKSCAN4Q969J2 545 aaPredicted RBP7.09□□□□□ -1.27
CHD9-217ENST00000565832 FBXO28Q9NVF7 368 aa7.09□□□□□ -1.27
CHD9-217ENST00000565832 PP2D1A8MPX8 630 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 H7C1D1 291 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 CCNT1O60563 726 aaKnown RBP7.08□□□□□ -1.28
CHD9-217ENST00000565832 BMP3P12645 472 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 RPS12P25398 132 aaKnown RBP7.08□□□□□ -1.28
CHD9-217ENST00000565832 RETREG3Q86VR2 466 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 ANKK1Q8NFD2 765 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 TBCKQ8TEA7 893 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 TBC1D5Q92609 795 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 STAMQ92783 540 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 P2RX7Q99572 595 aaKnown RBP7.08□□□□□ -1.28
CHD9-217ENST00000565832 C6orf50Q9HD87 102 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 GPRC5DQ9NZD1 345 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 USP25Q9UHP3 1055 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 SERTAD1Q9UHV2 236 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 PCDHA1Q9Y5I3 950 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 ARFGEF1Q9Y6D6 1849 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 ATP2C1P98194 919 aaPredicted RBP7.08□□□□□ -1.28
CHD9-217ENST00000565832 MAP3K10Q02779 954 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 CDC37Q16543 378 aaPredicted RBP7.08□□□□□ -1.28
CHD9-217ENST00000565832 BLOC1S3Q6QNY0 202 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 RNF19BQ6ZMZ0 732 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 GMCL1P1Q8NEA9 526 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 MTMR8Q96EF0 704 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 PLIN2Q99541 437 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 ZNF341Q9BYN7 854 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 PSTPIP2Q9H939 334 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 CBX8Q9HC52 389 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 RNF181Q9P0P0 153 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 PRR12Q9ULL5 1215 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 NOL7Q9UMY1 257 aaKnown RBP7.08□□□□□ -1.28
CHD9-217ENST00000565832 TMX2Q9Y320 296 aa7.08□□□□□ -1.28
CHD9-217ENST00000565832 SOWAHBA6NEL2 793 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 GOLGA8CPA6NN73 597 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 GNA11P29992 359 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 TNNI2P48788 182 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 ZNF165P49910 485 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 APLP1P51693 650 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 ADCY7P51828 1080 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 NR6A1Q15406 480 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 ZRSR1Q15695 479 aaKnown RBP7.07□□□□□ -1.28
CHD9-217ENST00000565832 DPCR1Q3MIW9 517 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 GPC2Q8N158 579 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 REXO1Q8N1G1 1221 aaKnown RBP7.07□□□□□ -1.28
CHD9-217ENST00000565832 DAGLBQ8NCG7 672 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 CNNM3Q8NE01 707 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 CCDC148Q8NFR7 591 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 DCAF4Q8WV16 495 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 DHX58Q96C10 678 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 GGA3Q9NZ52 723 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 CEP131Q9UPN4 1083 aa7.07□□□□□ -1.28
CHD9-217ENST00000565832 FAM237AA0A1B0GTK4 181 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 OPLAHO14841 1288 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 SLC37A4O43826 429 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 TDP2O95551 362 aa7.06□□□□□ -1.28
CHD9-217ENST00000565832 BMP6P22004 513 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms