RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 CST5P28325 142 aaPredicted RBP21.62■■□□□ 1.05
PKD1-223ENST00000561668 STXBP2Q15833 593 aa21.62■■□□□ 1.05
PKD1-223ENST00000561668 C1orf53Q5VUE5 145 aa21.62■■□□□ 1.05
PKD1-223ENST00000561668 TLK2Q86UE8 772 aa21.62■■□□□ 1.05
PKD1-223ENST00000561668 FANCBQ8NB91 859 aa21.62■■□□□ 1.05
PKD1-223ENST00000561668 LBHD1Q9BQE6 289 aaPredicted RBP21.62■■□□□ 1.05
PKD1-223ENST00000561668 SPZ1Q9BXG8 430 aa21.62■■□□□ 1.05
PKD1-223ENST00000561668 GNEQ9Y223 722 aaKnown RBP21.62■■□□□ 1.05
PKD1-223ENST00000561668 NID2Q14112 1375 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 ALPK3Q96L96 1907 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 GCOM1H8Y6P7 765 aaPredicted RBP21.61■■□□□ 1.05
PKD1-223ENST00000561668 PPP1R11O60927 126 aaPredicted RBP21.61■■□□□ 1.05
PKD1-223ENST00000561668 POLR2MP0CAP2 368 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 PPP2R5BQ15173 497 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 TRIM60Q495X7 471 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 DUSP28Q4G0W2 176 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 Q6ZUG5 572 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
PKD1-223ENST00000561668 RBM27Q9P2N5 1060 aaKnown RBP21.61■■□□□ 1.05
PKD1-223ENST00000561668 ELP1O95163 1332 aa21.6■■□□□ 1.05
PKD1-223ENST00000561668 MYADML2A6NDP7 307 aa21.6■■□□□ 1.05
PKD1-223ENST00000561668 RXRAP19793 462 aa21.6■■□□□ 1.05
PKD1-223ENST00000561668 EDNRBP24530 442 aa21.6■■□□□ 1.05
PKD1-223ENST00000561668 SNX17Q15036 470 aa21.6■■□□□ 1.05
PKD1-223ENST00000561668 FSCN1Q16658 493 aaKnown RBP21.6■■□□□ 1.05
PKD1-223ENST00000561668 BRDTQ58F21 947 aaPredicted RBP21.6■■□□□ 1.05
PKD1-223ENST00000561668 CCSAPQ6IQ19 270 aaPredicted RBP21.6■■□□□ 1.05
PKD1-223ENST00000561668 PRDM5Q9NQX1 630 aaPredicted RBP21.6■■□□□ 1.05
PKD1-223ENST00000561668 CYP46A1Q9Y6A2 500 aa21.6■■□□□ 1.05
PKD1-223ENST00000561668 DCDC2CA8MYV0 355 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 NKRFO15226 690 aaKnown RBP eCLIP21.59■■□□□ 1.05
PKD1-223ENST00000561668 CABYRO75952 493 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 TXNP10599 105 aaKnown RBP21.59■■□□□ 1.05
PKD1-223ENST00000561668 HSD17B4P51659 736 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 NKX3-2P78367 333 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 BEX3Q00994 111 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 TLE2Q04725 743 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 TTLL4Q14679 1199 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 MICU3Q86XE3 530 aa21.59■■□□□ 1.05
PKD1-223ENST00000561668 FAM217BQ9NTX9 383 aaPredicted RBP21.59■■□□□ 1.05
PKD1-223ENST00000561668 RBM28Q9NW13 759 aaKnown RBP21.59■■□□□ 1.05
PKD1-223ENST00000561668 NAP1L2Q9ULW6 460 aaPredicted RBP21.59■■□□□ 1.05
PKD1-223ENST00000561668 CEP290O15078 2479 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 RBM47A0AV96 593 aaKnown RBP21.58■■□□□ 1.05
PKD1-223ENST00000561668 ZBTB43O43298 467 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 EIF2AK2P19525 551 aaKnown RBP21.58■■□□□ 1.05
PKD1-223ENST00000561668 HOXA13P31271 388 aaPredicted RBP21.58■■□□□ 1.05
PKD1-223ENST00000561668 IRX5P78411 483 aaPredicted RBP21.58■■□□□ 1.05
PKD1-223ENST00000561668 GHRHRQ02643 423 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 FUT2Q10981 343 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 TOB2Q14106 344 aaPredicted RBP21.58■■□□□ 1.05
PKD1-223ENST00000561668 SEPT14Q6ZU15 432 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 RAB11FIP4Q86YS3 637 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 CCDC82Q8N4S0 544 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 SRBD1Q8N5C6 995 aaKnown RBP21.58■■□□□ 1.05
PKD1-223ENST00000561668 CUL5Q93034 780 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 COL20A1Q9P218 1284 aa21.58■■□□□ 1.05
PKD1-223ENST00000561668 MROH7Q68CQ1 1323 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 KLF18A0A0U1RQI7 1052 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 PQBP1O60828 265 aaKnown RBP21.57■■□□□ 1.04
PKD1-223ENST00000561668 EIF3JO75822 258 aaKnown RBP21.57■■□□□ 1.04
PKD1-223ENST00000561668 PLEKHA8P1O95397 391 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 NR3C2P08235 984 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 BMP8BP34820 402 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 MAGEA10P43363 369 aaPredicted RBP21.57■■□□□ 1.04
PKD1-223ENST00000561668 CPT1AP50416 773 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 TMTC3Q6ZXV5 915 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 FCHSD1Q86WN1 690 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 CMTR1Q8N1G2 835 aaKnown RBP21.57■■□□□ 1.04
PKD1-223ENST00000561668 OR6J1Q8NGC5 347 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 BRF1Q92994 677 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 GDF15Q99988 308 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 UBE2OQ9C0C9 1292 aaKnown RBP21.57■■□□□ 1.04
PKD1-223ENST00000561668 PXMP2Q9NR77 195 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 LCTP09848 1927 aa21.57■■□□□ 1.04
PKD1-223ENST00000561668 A0A0U1RQG5 324 aaPredicted RBP21.56■■□□□ 1.04
PKD1-223ENST00000561668 A0A1W2PPC1 479 aa21.56■■□□□ 1.04
PKD1-223ENST00000561668 MYCLP12524 364 aaPredicted RBP21.56■■□□□ 1.04
PKD1-223ENST00000561668 MDM2Q00987 491 aaPredicted RBP21.56■■□□□ 1.04
PKD1-223ENST00000561668 TOX2Q96NM4 488 aa21.56■■□□□ 1.04
PKD1-223ENST00000561668 BAZ2BQ9UIF8 2168 aaKnown RBP21.55■■□□□ 1.04
PKD1-223ENST00000561668 OPLAHO14841 1288 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 CTAGE5O15320 804 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 CLTBP09497 229 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 RBM25P49756 843 aaKnown RBP21.55■■□□□ 1.04
PKD1-223ENST00000561668 APOBRQ0VD83 1088 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 RTN1Q16799 776 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 TMEM63BQ5T3F8 832 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 CXCL17Q6UXB2 119 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 SMARCC2Q8TAQ2 1214 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 ZNF274Q96GC6 653 aaPredicted RBP21.55■■□□□ 1.04
PKD1-223ENST00000561668 UPF3BQ9BZI7 483 aaKnown RBP21.55■■□□□ 1.04
PKD1-223ENST00000561668 TMEM39AQ9NV64 488 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 POLR3EQ9NVU0 708 aa21.55■■□□□ 1.04
PKD1-223ENST00000561668 ARVCFO00192 962 aa21.54■■□□□ 1.04
PKD1-223ENST00000561668 TLR3O15455 904 aaKnown RBP21.54■■□□□ 1.04
PKD1-223ENST00000561668 ANKRD33Q7Z3H0 272 aa21.54■■□□□ 1.04
PKD1-223ENST00000561668 SEZ6LQ9BYH1 1024 aa21.54■■□□□ 1.04
PKD1-223ENST00000561668 PRO3102Q9H379 93 aa21.54■■□□□ 1.04
PKD1-223ENST00000561668 CCDC196A0A1B0GTZ2 297 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms