RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 MTA3Q9BTC8 594 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 ATP11BQ9Y2G3 1177 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 BOLA1Q9Y3E2 137 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 TAF6LQ9Y6J9 622 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 A0A0U1RQG5 324 aaPredicted RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 CD4P01730 458 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 ASGR1P07306 291 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 C6orf222P0C671 652 aaPredicted RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 SMPD1P17405 629 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 ANTXR2P58335 489 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 RPS6P62753 249 aaKnown RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 MDM2Q00987 491 aaPredicted RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 BAATQ14032 418 aaPredicted RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 KCNA10Q16322 511 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 DUSP28Q4G0W2 176 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 FAM109BQ6ICB4 259 aaPredicted RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 CYB5R4Q7L1T6 521 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 SH3RF1Q7Z6J0 888 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 NUP133Q8WUM0 1156 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 RUFY2Q8WXA3 655 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 MAP4K1Q92918 833 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 SNX21Q969T3 373 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 ZKSCAN3Q9BRR0 538 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 UBE2OQ9C0C9 1292 aaKnown RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 GPCPD1Q9NPB8 672 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 STARD7Q9NQZ5 370 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 COL20A1Q9P218 1284 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 ADD3Q9UEY8 706 aaKnown RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 CIZ1Q9ULV3 898 aaPredicted RBP8.03□□□□□ -1.12
SPG11-224ENST00000561268 GRIN2DO15399 1336 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 ABCB11O95342 1321 aa8.03□□□□□ -1.12
SPG11-224ENST00000561268 COL4A6Q14031 1691 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 KIAA1671Q9BY89 1806 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 PALM3A6NDB9 673 aaPredicted RBP8.02□□□□□ -1.13
SPG11-224ENST00000561268 ARVCFO00192 962 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 NKRFO15226 690 aaKnown RBP eCLIP8.02□□□□□ -1.13
SPG11-224ENST00000561268 CABYRO75952 493 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 HOXB1P14653 301 aaPredicted RBP8.02□□□□□ -1.13
SPG11-224ENST00000561268 RBM25P49756 843 aaKnown RBP8.02□□□□□ -1.13
SPG11-224ENST00000561268 HSD17B4P51659 736 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 TNFAIP2Q03169 654 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 TROAPQ12815 778 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 PDAP1Q13442 181 aaKnown RBP8.02□□□□□ -1.13
SPG11-224ENST00000561268 GRM4Q14833 912 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 QRICH1Q2TAL8 776 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 BMP2KLQ5H9B9 411 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 IQSEC1Q6DN90 963 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 NSMFQ6X4W1 530 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 RNF207Q6ZRF8 634 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 ADGRF4Q8IZF3 695 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 FERMT2Q96AC1 680 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 GLT1D1Q96MS3 346 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
SPG11-224ENST00000561268 MAP3K14Q99558 947 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 SEZ6LQ9BYH1 1024 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 LSG1Q9H089 658 aaKnown RBP8.02□□□□□ -1.13
SPG11-224ENST00000561268 CPVLQ9H3G5 476 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 RIOX1Q9H6W3 641 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 KAT14Q9H8E8 782 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 JMJD4Q9H9V9 463 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 MAD2L2Q9UI95 211 aa8.02□□□□□ -1.13
SPG11-224ENST00000561268 DDX49Q9Y6V7 483 aaKnown RBP8.02□□□□□ -1.13
SPG11-224ENST00000561268 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 E7EWF7 191 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 CYTH3O43739 400 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 PPP1R11O60927 126 aaPredicted RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 PARP1P09874 1014 aaKnown RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 GOLGA8HP0CJ92 632 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 PTGS1P23219 599 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 FSCN1Q16658 493 aaKnown RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 C9orf50Q5SZB4 431 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 TMEM63BQ5T3F8 832 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 IFIT1BQ5T764 474 aaKnown RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 L1TD1Q5T7N2 865 aaKnown RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 CCDC62Q6P9F0 684 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 STAG2Q8N3U4 1231 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 SAMD3Q8N6K7 520 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 SYTL5Q8TDW5 730 aaPredicted RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 BADQ92934 168 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 LBHD1Q9BQE6 289 aaPredicted RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 UBAC1Q9BSL1 405 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 SPC25Q9HBM1 224 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 PDGFCQ9NRA1 345 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 MTMR10Q9NXD2 777 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 MAP3K20Q9NYL2 800 aaKnown RBP8.01□□□□□ -1.13
SPG11-224ENST00000561268 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 MTMR7Q9Y216 660 aa8.01□□□□□ -1.13
SPG11-224ENST00000561268 NID2Q14112 1375 aa8□□□□□ -1.13
SPG11-224ENST00000561268 PTPDC1A2A3K4 754 aa8□□□□□ -1.13
SPG11-224ENST00000561268 A6NJR5 290 aa8□□□□□ -1.13
SPG11-224ENST00000561268 DCDC2CA8MYV0 355 aa8□□□□□ -1.13
SPG11-224ENST00000561268 ZBTB5O15062 677 aa8□□□□□ -1.13
SPG11-224ENST00000561268 PQBP1O60828 265 aaKnown RBP8□□□□□ -1.13
SPG11-224ENST00000561268 SLC4A3P48751 1232 aa8□□□□□ -1.13
SPG11-224ENST00000561268 EPHB4P54760 987 aa8□□□□□ -1.13
SPG11-224ENST00000561268 SMAD3P84022 425 aaKnown RBP8□□□□□ -1.13
SPG11-224ENST00000561268 PURAQ00577 322 aaKnown RBP8□□□□□ -1.13
SPG11-224ENST00000561268 BEX3Q00994 111 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms