RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 ZSCAN31Q96LW9 406 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 PXMP2Q9NR77 195 aa13.75□□□□□ -0.21
RABGGTA-218ENST00000560777 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 SEPT4O43236 478 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 CDKL5O76039 1030 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 DEXIO95424 95 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 EIF2AK2P19525 551 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 EN2P19622 333 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 TAPT1Q6NXT6 567 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 EEPD1Q7L9B9 569 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 SMARCC2Q8TAQ2 1214 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 CUL5Q93034 780 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 IWS1Q96ST2 819 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 CRISPLD2Q9H0B8 497 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 RIC8AQ9NPQ8 531 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 DDX20Q9UHI6 824 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 MCM3APO60318 1980 aa13.74□□□□□ -0.21
RABGGTA-218ENST00000560777 B4DLN1 442 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 ADAMTS3O15072 1205 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 CAPN15O75808 1086 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 NR3C2P08235 984 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 FDPSP14324 419 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 PDE4DQ08499 809 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 UBE2SQ16763 222 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 CCDC144BQ3MJ40 725 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 NSUN7Q8NE18 718 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 AIFM3Q96NN9 605 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 PDCD2LQ9BRP1 358 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 PDGFCQ9NRA1 345 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 ZHX1Q9UKY1 873 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 FAM184BQ9ULE4 1060 aa13.73□□□□□ -0.21
RABGGTA-218ENST00000560777 STK36Q9NRP7 1315 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 ESYT2A0FGR8 921 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 JAK2O60674 1132 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 MSCO60682 206 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 TFRCP02786 760 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 ADCY7P51828 1080 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 PGM5Q15124 567 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 STXBP2Q15833 593 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 ANO1Q5XXA6 986 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 VSIG10LQ86VR7 867 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 CCDC83Q8IWF9 413 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 VTA1Q9NP79 307 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 OGDHLQ9ULD0 1010 aa13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 RBBP6Q7Z6E9 1792 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-218ENST00000560777 FRMPD4Q14CM0 1322 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 RBM47A0AV96 593 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 ADCY6O43306 1168 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 EIF3JO75822 258 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 AKR1A1P14550 325 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 ADCYAP1R1P41586 468 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 MCM2P49736 904 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 CLK2P49760 499 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 IQSEC1Q6DN90 963 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 IL31RAQ8NI17 732 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 CCDC12Q8WUD4 166 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 TMX3Q96JJ7 454 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 LLPHQ9BRT6 129 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 C6orf50Q9HD87 102 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 TMEM260Q9NX78 707 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 PCDHA6Q9UN73 950 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 PCDHA8Q9Y5H6 950 aa13.71□□□□□ -0.21
RABGGTA-218ENST00000560777 SPDYE3A6NKU9 549 aa13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 RGS20O76081 388 aa13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 MYCLP12524 364 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 SMPD1P17405 629 aa13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 CAPN2P17655 700 aa13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 GNA11P29992 359 aa13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 NLRP5P59047 1200 aa13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 LENG1Q96BZ8 264 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
RABGGTA-218ENST00000560777 DUSP11O75319 330 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 RARBP10826 455 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 CCND2P30279 289 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 TNFAIP2Q03169 654 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 NPY5RQ15761 445 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 PCNX4Q63HM2 1172 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 CCDC148Q8NFR7 591 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms