RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 POTEJP0CG39 1038 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 MCM7P33993 719 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 INHBEP58166 350 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 SETQ01105 290 aaPredicted RBP12.33□□□□□ -0.44
PABPN1-203ENST00000553960 ZNF174Q15697 407 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 ZYXQ15942 572 aaKnown RBP12.33□□□□□ -0.44
PABPN1-203ENST00000553960 IL17AQ16552 155 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 PCNX4Q63HM2 1172 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 MAP1SQ66K74 1059 aaPredicted RBP12.33□□□□□ -0.44
PABPN1-203ENST00000553960 B3GNT9Q6UX72 402 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 DNERQ8NFT8 737 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 HAS1Q92839 578 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 CLMNQ96JQ2 1002 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 CSRNP2Q9H175 543 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 HOOK1Q9UJC3 728 aaKnown RBP12.33□□□□□ -0.44
PABPN1-203ENST00000553960 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 PFASO15067 1338 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 RAD21O60216 631 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 CCNT1O60563 726 aaKnown RBP12.32□□□□□ -0.44
PABPN1-203ENST00000553960 GJA5P36382 358 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 STAT3P40763 770 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 GCLCP48506 637 aaPredicted RBP12.32□□□□□ -0.44
PABPN1-203ENST00000553960 IRF5Q13568 498 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 TMEM132BQ14DG7 1078 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 LETM2Q2VYF4 491 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 SPRYD7Q5W111 196 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 CST9Q5W186 159 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 TRIML1Q8N9V2 468 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 IQUBQ8NA54 791 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 SYTL5Q8TDW5 730 aaPredicted RBP12.32□□□□□ -0.44
PABPN1-203ENST00000553960 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 IWS1Q96ST2 819 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 RIT2Q99578 217 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
PABPN1-203ENST00000553960 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 NMRK2Q9NPI5 230 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 TMEM260Q9NX78 707 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
PABPN1-203ENST00000553960 DDX25Q9UHL0 483 aaKnown RBP12.32□□□□□ -0.44
PABPN1-203ENST00000553960 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 ACTN4O43707 911 aaKnown RBP12.31□□□□□ -0.44
PABPN1-203ENST00000553960 OSBPP22059 807 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 TXLNAP40222 546 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
PABPN1-203ENST00000553960 HERVK_113P62684 666 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 SPIRE1Q08AE8 756 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 CALCRLQ16602 461 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 UBE2SQ16763 222 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 USH1GQ495M9 461 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 CEP55Q53EZ4 464 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 ABRAQ8N0Z2 381 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 CLIC6Q96NY7 704 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 TRERF1Q96PN7 1200 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 STK17AQ9UEE5 414 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 FZD1Q9UP38 647 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 UBIAD1Q9Y5Z9 338 aa12.31□□□□□ -0.44
PABPN1-203ENST00000553960 TRAF5O00463 557 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 NFIBO00712 420 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 CCDC192P0DO97 292 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 RPS6P62753 249 aaKnown RBP12.3□□□□□ -0.44
PABPN1-203ENST00000553960 GRIN1Q05586 938 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 PPP2R5CQ13362 524 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 TMEM266Q2M3C6 531 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 UVSSAQ2YD98 709 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 TREML2Q5T2D2 321 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 DLK2Q6UY11 383 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 VSIG10LQ86VR7 867 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 MORC4Q8TE76 937 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
PABPN1-203ENST00000553960 SLC5A5Q92911 643 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 BPIFA3Q9BQP9 254 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 SPATC1LQ9H0A9 340 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 MROH8Q9H579 483 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 RAVER2Q9HCJ3 691 aaKnown RBP12.3□□□□□ -0.44
PABPN1-203ENST00000553960 RNF146Q9NTX7 359 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 PCDHA12Q9UN75 941 aa12.3□□□□□ -0.44
PABPN1-203ENST00000553960 CTDP1Q9Y5B0 961 aaPredicted RBP12.3□□□□□ -0.44
PABPN1-203ENST00000553960 DNAJC25-GNG10A0A024R161 153 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 VWA3AA6NCI4 1184 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 FAM86B1E9PN63 330 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 SLC37A4O43826 429 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 CNMDO75829 334 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 PSMD10O75832 226 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 CELF2O95319 508 aaKnown RBP12.29□□□□□ -0.44
PABPN1-203ENST00000553960 TDP2O95551 362 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 CFBP00751 764 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 FAM86B2P0C5J1 330 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 EDNRBP24530 442 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms