RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 IL17REQ8NFR9 667 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 LENG1Q96BZ8 264 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 SLC9A7Q96T83 725 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 FOXQ1Q9C009 403 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 GSX1Q9H4S2 264 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 CWC22Q9HCG8 908 aaKnown RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 NARFQ9UHQ1 456 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 ZBTB1Q9Y2K1 713 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 ACTL7BQ9Y614 415 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 MRPL42Q9Y6G3 142 aaKnown RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 C4AP0C0L4 1744 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 COL5A3P25940 1745 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 KAT6BQ8WYB5 2073 aa3.21□□□□□ -1.9
CPSF6-207ENST00000551516 COL3A1P02461 1466 aaPredicted RBP3.21□□□□□ -1.9
CPSF6-207ENST00000551516 BRCA2P51587 3418 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 FAM86C2PA6NEL3 165 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 RGS13O14921 159 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 FOXN1O15353 648 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 RNMTO43148 476 aaKnown RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 KCNQ3O43525 872 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 CAMTA2O94983 1202 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 ALX3O95076 343 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 TIAF1O95411 115 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 CST3P01034 146 aaPredicted RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 NEFMP07197 916 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 HSPA1AP0DMV8 641 aaKnown RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 HSPA1BP0DMV9 641 aaKnown RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 SRGNP10124 158 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 ACRP10323 421 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 NAT2P11245 290 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 GLB1P16278 677 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 HSD3B2P26439 372 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 CAP2P40123 477 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 INSM1Q01101 510 aaPredicted RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 SLC7A5Q01650 507 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 SLC39A6Q13433 755 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 MAP7Q14244 749 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 ZYXQ15942 572 aaKnown RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 GNPTABQ3T906 1256 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 MTERF2Q49AM1 385 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 PRAMEF13Q5VWM6 474 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 CST9Q5W186 159 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 KIAA1211LQ6NV74 962 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 EEPD1Q7L9B9 569 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 JAZF1Q86VZ6 243 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 C2CD4AQ8NCU7 369 aaPredicted RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 ST13P5Q8NFI4 369 aaPredicted RBP3.2□□□□□ -1.9
CPSF6-207ENST00000551516 GIMAP7Q8NHV1 300 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 XAGE3Q8WTP9 111 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 ISL2Q96A47 359 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 DNAJC7Q99615 494 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 KIF2CQ99661 725 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 EPN3Q9H201 632 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 SLC52A2Q9HAB3 445 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 FBRSQ9HAH7 460 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 FAM105AQ9NUU6 356 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 TMOD3Q9NYL9 352 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 PIM2Q9P1W9 311 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 ADAMTS8Q9UP79 889 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 ITGB4P16144 1822 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 CNTNAP1P78357 1384 aa3.2□□□□□ -1.9
CPSF6-207ENST00000551516 KDM2BQ8NHM5 1336 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 TJP1Q07157 1748 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 WDR90Q96KV7 1748 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 SZT2Q5T011 3432 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 ANKRD62A6NC57 917 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 IQCA1LA6NCM1 817 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 B2RBV5 119 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 FZD9O00144 591 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 AGRPO00253 132 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 CLEC3AO75596 197 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 VEGFAP15692 232 aaPredicted RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 RAB6AP20340 208 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 HMGB2P26583 209 aaKnown RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 POLR2BP30876 1174 aaKnown RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 NTF4P34130 210 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 IREB2P48200 963 aaKnown RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 ZNF143P52747 638 aaPredicted RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 SLBPQ14493 270 aaKnown RBP eCLIP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 NKG7Q16617 165 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 MTHFSDQ2M296 383 aaKnown RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 UVSSAQ2YD98 709 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 CRY2Q49AN0 593 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 DALRD3Q5D0E6 543 aaKnown RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 LCE2AQ5TA79 106 aaPredicted RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 EGFLAMQ63HQ2 1017 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 TBC1D9BQ66K14 1250 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 PRR5LQ6MZQ0 368 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 CDPF1Q6NVV7 123 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 ARHGAP27Q6ZUM4 889 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 ALYREFQ86V81 257 aaKnown RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 CCDC144CPQ8IYA2 1237 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 BAHD1Q8TBE0 780 aaPredicted RBP3.19□□□□□ -1.9
CPSF6-207ENST00000551516 MICAL1Q8TDZ2 1067 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 SH3TC2Q8TF17 1288 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 CYB5D2Q8WUJ1 264 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 WFDC12Q8WWY7 111 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 APPBP2Q92624 585 aa3.19□□□□□ -1.9
CPSF6-207ENST00000551516 ZNF669Q96BR6 464 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms