RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PDE4DQ08499 809 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 CDC37Q16543 378 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 DEFB128Q7Z7B8 93 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 ADGRF4Q8IZF3 695 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 ENAHQ8N8S7 591 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 PNMA1Q8ND90 353 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 ESR2Q92731 530 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 TNKSO95271 1327 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 WDR19Q8NEZ3 1342 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 A6NJR5 290 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 PDE4AP27815 886 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 CCDC85BQ15834 202 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 LY6KQ17RY6 165 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 FAM47CQ5HY64 1035 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 CCDC62Q6P9F0 684 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 STAG2Q8N3U4 1231 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 ANKS1AQ92625 1134 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 VAT1LQ9HCJ6 419 aa13.54□□□□□ -0.24
PRPF40B-212ENST00000551111 XIRP2A4UGR9 3374 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 LOC102724159A0A0B4J2E5 919 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 OPLAHO14841 1288 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 TXNP10599 105 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 PPP2R5BQ15173 497 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 PWP2Q15269 919 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 SLC35G1Q2M3R5 365 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 QRICH1Q2TAL8 776 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 DNERQ8NFT8 737 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 SYTL5Q8TDW5 730 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 SCFD2Q8WU76 684 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 MTG1Q9BT17 334 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 RNF41Q9H4P4 317 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 JMJD4Q9H9V9 463 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 POLR3EQ9NVU0 708 aa13.53□□□□□ -0.24
PRPF40B-212ENST00000551111 RFXAPO00287 272 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 ARHGEF15O94989 841 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 CPT1AP50416 773 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 CHST3Q7LGC8 479 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 RGS22Q8NE09 1264 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 KAT2BQ92831 832 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 MSRAQ9UJ68 235 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 TAF6LQ9Y6J9 622 aa13.52□□□□□ -0.25
PRPF40B-212ENST00000551111 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 IGFBP4P22692 258 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 MFAP1P55081 439 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 ARHGAP1Q07960 439 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 GPNMBQ14956 572 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 IQCA1Q86XH1 822 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 GAS2L1Q99501 681 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 KAT14Q9H8E8 782 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
PRPF40B-212ENST00000551111 ABCB11O95342 1321 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 EPOPA6NHQ4 379 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 NKRFO15226 690 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 SORBS3O60504 671 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 IQCF3P0C7M6 154 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 SEC23AQ15436 765 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 RAB30Q15771 203 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 TCTN1Q2MV58 587 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 FBXO11Q86XK2 927 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 RPUSD2Q8IZ73 545 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 DHX38Q92620 1227 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 RMDN3Q96TC7 470 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 SEZ6LQ9BYH1 1024 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 CERS4Q9HA82 394 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 SLC28A3Q9HAS3 691 aa13.5□□□□□ -0.25
PRPF40B-212ENST00000551111 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 RGS20O76081 388 aa13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 MMP3P08254 477 aa13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 SUPT20HL2P0C7V6 817 aa13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 ATP2A2P16615 1042 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 PTH1RQ03431 593 aa13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 HIC1Q14526 733 aa13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 IMMTQ16891 758 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
PRPF40B-212ENST00000551111 KRT40Q6A162 431 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms