RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 GMIPQ9P107 970 aa9.18□□□□□ -0.94
CHPT1-203ENST00000546873 GREM1O60565 184 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 LRRN2O75325 713 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 MCM4P33991 863 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 APOBRQ0VD83 1088 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 OXR1Q8N573 874 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 TMEM87AQ8NBN3 555 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 BHLHE22Q8NFJ8 381 aaPredicted RBP9.17□□□□□ -0.94
CHPT1-203ENST00000546873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.17□□□□□ -0.942e-6■■■■■ 39.8
CHPT1-203ENST00000546873 ADAMTS10Q9H324 1103 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 USP35Q9P2H5 1018 aa9.17□□□□□ -0.94
CHPT1-203ENST00000546873 SLC22A31A6NKX4 558 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 ATE1O95260 518 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 TNNT2P45379 298 aaPredicted RBP9.16□□□□□ -0.94
CHPT1-203ENST00000546873 ZNF165P49910 485 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 RAD51AP2Q09MP3 1159 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 SEZ6Q53EL9 994 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 NUDCQ9Y266 331 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 PCDHA11Q9Y5I1 949 aa9.16□□□□□ -0.94
CHPT1-203ENST00000546873 USP6P35125 1406 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 DBX1A6NMT0 343 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 DNAJA2O60884 412 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 CHRNA2Q15822 529 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 GPR162Q16538 588 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 LRRFIP1Q32MZ4 808 aaKnown RBP9.15□□□□□ -0.94
CHPT1-203ENST00000546873 PRR23BQ6ZRT6 265 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 PTF1AQ7RTS3 328 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHPT1-203ENST00000546873 PDZD8Q8NEN9 1154 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 ENOX1Q8TC92 643 aaKnown RBP9.15□□□□□ -0.94
CHPT1-203ENST00000546873 COG3Q96JB2 828 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 PRDM11Q9NQV5 511 aa9.15□□□□□ -0.94
CHPT1-203ENST00000546873 TTC21AQ8NDW8 1320 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 HPXP02790 462 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 HSPA6P17066 643 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 JAG1P78504 1218 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 MESP2Q0VG99 397 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 DUSP4Q13115 394 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 GK5Q6ZS86 529 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 SPPL2CQ8IUH8 684 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 REXO1Q8N1G1 1221 aaKnown RBP9.14□□□□□ -0.95
CHPT1-203ENST00000546873 NSUN3Q9H649 340 aaKnown RBP9.14□□□□□ -0.95
CHPT1-203ENST00000546873 EHMT1Q9H9B1 1298 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 ADAMTS1Q9UHI8 967 aa9.14□□□□□ -0.95
CHPT1-203ENST00000546873 SSU72P8A0A1W2PR75 194 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 RBM47A0AV96 593 aaKnown RBP9.13□□□□□ -0.95
CHPT1-203ENST00000546873 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-203ENST00000546873 RBAK-RBAKDNI3L0D1 243 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 FYB1O15117 783 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 ZNF16P17020 682 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-203ENST00000546873 RAP1GAPP47736 663 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 MTHFSP49914 203 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 NMIQ13287 307 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-203ENST00000546873 KIAA0825Q8IV33 1275 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 LILRA2Q8N149 483 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 FBXO15Q8NCQ5 510 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-203ENST00000546873 NKD1Q969G9 470 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 DIRC2Q96SL1 478 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 UBP1Q9NZI7 540 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 RGPD8O14715 1765 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-203ENST00000546873 COL3A1P02461 1466 aaPredicted RBP9.13□□□□□ -0.95
CHPT1-203ENST00000546873 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
CHPT1-203ENST00000546873 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 ACEP12821 1306 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 FITM1A5D6W6 292 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 ZNF76P36508 570 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 CCNFP41002 786 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 CRKP46108 304 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 OVOS1Q6IE37 1185 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 SYDE1Q6ZW31 735 aaPredicted RBP9.12□□□□□ -0.95
CHPT1-203ENST00000546873 NGDNQ8NEJ9 315 aaKnown RBP9.12□□□□□ -0.95
CHPT1-203ENST00000546873 SPON2Q9BUD6 331 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 NT5C1AQ9BXI3 368 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 PNNQ9H307 717 aaKnown RBP9.12□□□□□ -0.95
CHPT1-203ENST00000546873 EPB41L4BQ9H329 900 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 DCP1AQ9NPI6 582 aaPredicted RBP9.12□□□□□ -0.95
CHPT1-203ENST00000546873 OVOS2A0A0J9YW53 1432 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 OVOS2Q6IE36 1432 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
CHPT1-203ENST00000546873 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
CHPT1-203ENST00000546873 MAPK8IP3Q9UPT6 1336 aa9.11□□□□□ -0.95
CHPT1-203ENST00000546873 ERVFC1P60507 584 aa9.11□□□□□ -0.95
CHPT1-203ENST00000546873 CHRNEQ04844 493 aa9.11□□□□□ -0.95
CHPT1-203ENST00000546873 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
CHPT1-203ENST00000546873 NLRC3Q7RTR2 1065 aa9.11□□□□□ -0.95
CHPT1-203ENST00000546873 MTFR1LQ9H019 292 aa9.11□□□□□ -0.95
CHPT1-203ENST00000546873 PIK3C2AO00443 1686 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 ALS2Q96Q42 1657 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 TTC21BQ7Z4L5 1316 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 SHISA3A0PJX4 238 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 NFIBO00712 420 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 PLSCR1O15162 318 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 CLEC3AO75596 197 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 UBOX5O94941 541 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 ZGLP1P0C6A0 271 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 NME9Q86XW9 330 aa9.1□□□□□ -0.95
CHPT1-203ENST00000546873 SYTL5Q8TDW5 730 aaPredicted RBP9.1□□□□□ -0.95
CHPT1-203ENST00000546873 RUNDC1Q96C34 613 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms