RNA–Protein interactions for RNA: ENST00000546455.5

PCED1B-202, Transcript of PC-esterase domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCED1B, Length 2,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-202ENST00000546455 ZNHIT6Q9NWK9 470 aaKnown RBP17.35■□□□□ 0.37
PCED1B-202ENST00000546455 GAKO14976 1311 aa17.35■□□□□ 0.37
PCED1B-202ENST00000546455 PPP1R11O60927 126 aaPredicted RBP17.35■□□□□ 0.37
PCED1B-202ENST00000546455 N4BP1O75113 896 aaKnown RBP17.35■□□□□ 0.37
PCED1B-202ENST00000546455 ATP2B2Q01814 1243 aa17.35■□□□□ 0.37
PCED1B-202ENST00000546455 FAM114A1Q8IWE2 563 aa17.35■□□□□ 0.37
PCED1B-202ENST00000546455 LARP4BQ92615 738 aaKnown RBP17.35■□□□□ 0.37
PCED1B-202ENST00000546455 FAM163AQ96GL9 167 aaPredicted RBP17.35■□□□□ 0.37
PCED1B-202ENST00000546455 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
PCED1B-202ENST00000546455 CDK5RAP2Q96SN8 1893 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 POTEB2H3BUK9 544 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 CYLC1P35663 651 aaPredicted RBP17.34■□□□□ 0.37
PCED1B-202ENST00000546455 NOVP48745 357 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 KRT83P78385 493 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 ECM1Q16610 540 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 CERS3Q8IU89 383 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
PCED1B-202ENST00000546455 SNX29Q8TEQ0 813 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 SMCR8Q8TEV9 937 aaPredicted RBP17.34■□□□□ 0.37
PCED1B-202ENST00000546455 HNRNPLLQ8WVV9 542 aaKnown RBP17.34■□□□□ 0.37
PCED1B-202ENST00000546455 L1RE1Q9UN81 338 aa17.34■□□□□ 0.37
PCED1B-202ENST00000546455 ESYT2A0FGR8 921 aa17.33■□□□□ 0.37
PCED1B-202ENST00000546455 ZNF263O14978 683 aa17.33■□□□□ 0.37
PCED1B-202ENST00000546455 ZNF185O15231 689 aa17.33■□□□□ 0.37
PCED1B-202ENST00000546455 CENPPQ6IPU0 288 aa17.33■□□□□ 0.37
PCED1B-202ENST00000546455 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.37
PCED1B-202ENST00000546455 NUP58Q9BVL2 599 aa17.33■□□□□ 0.37
PCED1B-202ENST00000546455 SAR1BQ9Y6B6 198 aa17.33■□□□□ 0.37
PCED1B-202ENST00000546455 SMARCA1P28370 1054 aa17.33■□□□□ 0.36
PCED1B-202ENST00000546455 SCNN1DP51172 638 aa17.33■□□□□ 0.36
PCED1B-202ENST00000546455 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
PCED1B-202ENST00000546455 HDXQ7Z353 690 aa17.33■□□□□ 0.36
PCED1B-202ENST00000546455 SLF2Q8IX21 1173 aa17.33■□□□□ 0.36
PCED1B-202ENST00000546455 ADGRF4Q8IZF3 695 aa17.33■□□□□ 0.36
PCED1B-202ENST00000546455 JMJD4Q9H9V9 463 aa17.33■□□□□ 0.36
PCED1B-202ENST00000546455 KRT86O43790 486 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 ERLIN1O75477 346 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCED1B-202ENST00000546455 GABPAQ06546 454 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 SEMA3FQ13275 785 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 TMEM266Q2M3C6 531 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 UNC13DQ70J99 1090 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 CERS5Q8N5B7 392 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 CCDC155Q8N6L0 562 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 DDX12PQ92771 950 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 ERGIC2Q96RQ1 377 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 MYH1P12882 1939 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 EIF3CLB5ME19 914 aaKnown RBP17.32■□□□□ 0.36
PCED1B-202ENST00000546455 RAD21O60216 631 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 DDR1Q08345 913 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 VWA3BQ502W6 1294 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 C2CD5Q86YS7 1000 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 RETREG2Q8NC44 543 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 TBC1D22AQ8WUA7 517 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 RAD54LQ92698 747 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 EIF3CQ99613 913 aaKnown RBP17.32■□□□□ 0.36
PCED1B-202ENST00000546455 NDST4Q9H3R1 872 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 MMRN2Q9H8L6 949 aa17.32■□□□□ 0.36
PCED1B-202ENST00000546455 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
PCED1B-202ENST00000546455 ZMYND10O75800 440 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 IPO7O95373 1038 aaKnown RBP17.31■□□□□ 0.36
PCED1B-202ENST00000546455 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 USP17L10C9JJH3 530 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 BBOX1O75936 387 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 CCDC96Q2M329 555 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 KRT79Q5XKE5 535 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 CCDC42Q96M95 316 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 DRC1Q96MC2 740 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 HINFPQ9BQA5 517 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 TBC1D7Q9P0N9 293 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 ARHGAP20Q9P2F6 1191 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 STK17AQ9UEE5 414 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
PCED1B-202ENST00000546455 EP400Q96L91 3159 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 IGKV6D-41A0A0C4DH26 115 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 SSBP05455 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCED1B-202ENST00000546455 ZNF543Q08ER8 600 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 CASP8Q14790 479 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
PCED1B-202ENST00000546455 CCDC170Q8IYT3 715 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 JADE2Q9NQC1 790 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 VPS18Q9P253 973 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 LRRIQ3A6PVS8 624 aaPredicted RBP17.3■□□□□ 0.36
PCED1B-202ENST00000546455 PDE2AO00408 941 aaPredicted RBP17.3■□□□□ 0.36
PCED1B-202ENST00000546455 SNHG28P0DPA3 235 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 FAM193AP78312 1265 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 SHROOM1Q2M3G4 852 aaPredicted RBP17.3■□□□□ 0.36
PCED1B-202ENST00000546455 HAS1Q92839 578 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 FGFBP2Q9BYJ0 223 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 MLXIPQ9HAP2 919 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 DDX25Q9UHL0 483 aaKnown RBP17.3■□□□□ 0.36
PCED1B-202ENST00000546455 ADAM21Q9UKJ8 722 aa17.3■□□□□ 0.36
PCED1B-202ENST00000546455 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
PCED1B-202ENST00000546455 CCDC66A2RUB6 948 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms