RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CALCRLQ16602 461 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 FILIP1LQ4L180 1135 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 APTXQ7Z2E3 356 aaKnown RBP12.91□□□□□ -0.34
USP35-207ENST00000530546 GOLGA1Q92805 767 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 GJA10Q969M2 543 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 SLC1A4P43007 532 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 IGSF22Q8N9C0 903 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 TC2NQ8N9U0 490 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 CEP89Q96ST8 783 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 PI4KBQ9UBF8 816 aa12.91□□□□□ -0.34
USP35-207ENST00000530546 ESYT2A0FGR8 921 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 PES1O00541 588 aaKnown RBP12.9□□□□□ -0.34
USP35-207ENST00000530546 N4BP3O15049 544 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
USP35-207ENST00000530546 SLFN13Q68D06 897 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 MCTP2Q6DN12 878 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 NUP88Q99567 741 aaPredicted RBP12.9□□□□□ -0.34
USP35-207ENST00000530546 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.34
USP35-207ENST00000530546 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 MRFAP1Q9Y605 127 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 MARCH6O60337 910 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 CCDC172P0C7W6 258 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 GSCP56915 257 aaPredicted RBP12.9□□□□□ -0.34
USP35-207ENST00000530546 ASIC1P78348 528 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
USP35-207ENST00000530546 KRT31Q15323 416 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 GPATCH4Q5T3I0 446 aaKnown RBP12.9□□□□□ -0.34
USP35-207ENST00000530546 MMS22LQ6ZRQ5 1243 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 CEP83Q9Y592 693 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 NRXN2Q9P2S2 1712 aa12.9□□□□□ -0.34
USP35-207ENST00000530546 POTEMA6NI47 508 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 POTEB2H3BUK9 544 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 RBL2Q08999 1139 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 HDXQ7Z353 690 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 TMEM139Q8IV31 216 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 SLX4Q8IY92 1834 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.35
USP35-207ENST00000530546 DESI2Q9BSY9 194 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.35
USP35-207ENST00000530546 KBTBD4Q9NVX7 518 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 VPS18Q9P253 973 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 LRWD1Q9UFC0 647 aa12.9□□□□□ -0.35
USP35-207ENST00000530546 ZBTB5O15062 677 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 KLRC4O43908 158 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 PMS1P54277 932 aaKnown RBP12.89□□□□□ -0.35
USP35-207ENST00000530546 TUBB4BP68371 445 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 ICA1Q05084 483 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 AK8Q96MA6 479 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 MMTAG2Q9BU76 263 aaKnown RBP12.89□□□□□ -0.35
USP35-207ENST00000530546 FAM107BQ9H098 131 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 EHD4Q9H223 541 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 MYO3BQ8WXR4 1341 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 CLRN2A0PK11 232 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L15C9J2P7 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L13C9JLJ4 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 AKR1B15C9JRZ8 316 aaPredicted RBP12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L11C9JVI0 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L18D6R9N7 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L22D6RA61 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 hCG_1984214I3L0E3 225 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 FANCGO15287 622 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 EDIL3O43854 480 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 PDE4DQ08499 809 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 KCNJ12Q14500 433 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 MTF1Q14872 753 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 QRICH1Q2TAL8 776 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 TOGARAM2Q6ZUX3 1019 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 ZNF713Q8N859 430 aaPredicted RBP12.89□□□□□ -0.35
USP35-207ENST00000530546 CUL5Q93034 780 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 PSTPIP2Q9H939 334 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 RIC8AQ9NPQ8 531 aa12.89□□□□□ -0.35
USP35-207ENST00000530546 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 TCP10L2B9ZVM9 353 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 ARHGAP6O43182 974 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
USP35-207ENST00000530546 RAD17O75943 681 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 TAL1P17542 331 aaPredicted RBP12.88□□□□□ -0.35
USP35-207ENST00000530546 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 TRIM47Q96LD4 638 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 IDI2Q9BXS1 227 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms