RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 RTN1Q16799 776 aa12.77□□□□□ -0.37
CCDC84-205ENST00000528088 SWT1Q5T5J6 900 aaKnown RBP12.77□□□□□ -0.37
CCDC84-205ENST00000528088 APOA5Q6Q788 366 aa12.77□□□□□ -0.37
CCDC84-205ENST00000528088 BTNL9Q6UXG8 535 aa12.77□□□□□ -0.37
CCDC84-205ENST00000528088 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
CCDC84-205ENST00000528088 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
CCDC84-205ENST00000528088 ZNFX1Q9P2E3 1918 aaKnown RBP12.76□□□□□ -0.37
CCDC84-205ENST00000528088 SLC25A27O95847 323 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 ALAS1P13196 640 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 PSEN2P49810 448 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 METAP2P50579 478 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC84-205ENST00000528088 CDC37Q16543 378 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-205ENST00000528088 USH1GQ495M9 461 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 RIOX2Q8IUF8 465 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC84-205ENST00000528088 MROH8Q9H579 483 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 ZNF214Q9UL59 606 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-205ENST00000528088 BRPF3Q9ULD4 1205 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 ADAMTS5Q9UNA0 930 aa12.76□□□□□ -0.37
CCDC84-205ENST00000528088 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-205ENST00000528088 FARP2O94887 1054 aaPredicted RBP12.75□□□□□ -0.37
CCDC84-205ENST00000528088 TFRCP02786 760 aaKnown RBP12.75□□□□□ -0.37
CCDC84-205ENST00000528088 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
CCDC84-205ENST00000528088 OAZ1P54368 228 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 FANCBQ8NB91 859 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 REPS2Q8NFH8 660 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 SOCS4Q8WXH5 440 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 AGBL1Q96MI9 1066 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 MAP3K14Q99558 947 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 LZTS2Q9BRK4 669 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 RANBP17Q9H2T7 1088 aaKnown RBP12.75□□□□□ -0.37
CCDC84-205ENST00000528088 RBM28Q9NW13 759 aaKnown RBP12.75□□□□□ -0.37
CCDC84-205ENST00000528088 FLRT1Q9NZU1 646 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
CCDC84-205ENST00000528088 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
CCDC84-205ENST00000528088 RPTORQ8N122 1335 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 CCDC196A0A1B0GTZ2 297 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 ICAM1P05362 532 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 FCER1AP12319 257 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
CCDC84-205ENST00000528088 RGS2P41220 211 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
CCDC84-205ENST00000528088 STK3Q13188 491 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 KCTD2Q14681 263 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 MAP3K21Q5TCX8 1036 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
CCDC84-205ENST00000528088 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 NPLOC4Q8TAT6 608 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
CCDC84-205ENST00000528088 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
CCDC84-205ENST00000528088 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 MMP19Q99542 508 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 JMJD4Q9H9V9 463 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 PNMA2Q9UL42 364 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 CEP290O15078 2479 aa12.74□□□□□ -0.37
CCDC84-205ENST00000528088 H0YGN5 161 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 CCND3P30281 292 aaPredicted RBP12.73□□□□□ -0.37
CCDC84-205ENST00000528088 RBM25P49756 843 aaKnown RBP12.73□□□□□ -0.37
CCDC84-205ENST00000528088 AK2P54819 239 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
CCDC84-205ENST00000528088 TOB2Q14106 344 aaPredicted RBP12.73□□□□□ -0.37
CCDC84-205ENST00000528088 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 DPP9Q86TI2 863 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 ANKRD35Q8N283 1001 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 PIGSQ96S52 555 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 APBA2Q99767 749 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 ACAD9Q9H845 621 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
CCDC84-205ENST00000528088 FBXO40Q9UH90 709 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 SEPT9Q9UHD8 586 aaPredicted RBP12.73□□□□□ -0.37
CCDC84-205ENST00000528088 RIPK3Q9Y572 518 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 PLXNA1Q9UIW2 1896 aa12.73□□□□□ -0.37
CCDC84-205ENST00000528088 SLC15A5A6NIM6 579 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 CPLX1O14810 134 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 ATP2A1O14983 1001 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 ZBTB5O15062 677 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 GRB14Q14449 540 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 TKFCQ3LXA3 575 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 TMTC3Q6ZXV5 915 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 CHST13Q8NET6 341 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 DPF3Q92784 378 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 PAWRQ96IZ0 340 aaKnown RBP12.72□□□□□ -0.37
CCDC84-205ENST00000528088 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 SLC5A4Q9NY91 659 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 ZNF536O15090 1300 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 STRNO43815 780 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 COBLO75128 1261 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 ADORA2AP29274 412 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 RCAN1P53805 252 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 AKAP17AQ02040 695 aaKnown RBP12.72□□□□□ -0.37
CCDC84-205ENST00000528088 RABEP1Q15276 862 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 CPLX2Q6PUV4 134 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms