RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
PVT1-216ENST00000523068 PCDHA1Q9Y5I3 950 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 BAZ2BQ9UIF8 2168 aaKnown RBP12.65□□□□□ -0.38
PVT1-216ENST00000523068 KPNA6O60684 536 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 CFBP00751 764 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 CD4P01730 458 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 TXNP10599 105 aaKnown RBP12.65□□□□□ -0.38
PVT1-216ENST00000523068 TROAPQ12815 778 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 PPIGQ13427 754 aaKnown RBP eCLIP12.65□□□□□ -0.383e-7■■□□□ 14.2
PVT1-216ENST00000523068 STXBP2Q15833 593 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 TMEM63BQ5T3F8 832 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 ARHGEF16Q5VV41 709 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
PVT1-216ENST00000523068 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 CHST3Q7LGC8 479 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 MB21D2Q8IYB1 491 aaPredicted RBP12.65□□□□□ -0.38
PVT1-216ENST00000523068 TMTC2Q8N394 836 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 IGDCC4Q8TDY8 1250 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 TBC1D5Q92609 795 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 ESYT1Q9BSJ8 1104 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 LSG1Q9H089 658 aaKnown RBP12.65□□□□□ -0.38
PVT1-216ENST00000523068 TAF6LQ9Y6J9 622 aa12.65□□□□□ -0.38
PVT1-216ENST00000523068 SCN10AQ9Y5Y9 1956 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 MYL3P08590 195 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 PTGS1P23219 599 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 KIF5BP33176 963 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 MCM5P33992 734 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 HSD17B4P51659 736 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 ANTXR2P58335 489 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 GHRHRQ02643 423 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 TMEM199Q8N511 208 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 RNPC3Q96LT9 517 aaKnown RBP12.64□□□□□ -0.39
PVT1-216ENST00000523068 MTG1Q9BT17 334 aaPredicted RBP12.64□□□□□ -0.39
PVT1-216ENST00000523068 ANO2Q9NQ90 1003 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 COL20A1Q9P218 1284 aa12.64□□□□□ -0.39
PVT1-216ENST00000523068 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 A6NJR5 290 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 EIF3JO75822 258 aaKnown RBP12.63□□□□□ -0.39
PVT1-216ENST00000523068 DDAH1O94760 285 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 SMAD3P84022 425 aaKnown RBP12.63□□□□□ -0.39
PVT1-216ENST00000523068 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
PVT1-216ENST00000523068 NECTIN1Q15223 517 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 CTCFLQ8NI51 663 aaPredicted RBP12.63□□□□□ -0.39
PVT1-216ENST00000523068 PIGSQ96S52 555 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 SENP2Q9HC62 589 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 PXMP2Q9NR77 195 aa12.63□□□□□ -0.39
PVT1-216ENST00000523068 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 LAMA2P24043 3122 aaKnown RBP12.62□□□□□ -0.39
PVT1-216ENST00000523068 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 SLC27A2O14975 620 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 PRC1O43663 620 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
PVT1-216ENST00000523068 GH1P01241 217 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 NR3C2P08235 984 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 SUPT20HL2P0C7V6 817 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 CALM1P0DP23 149 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 CALM2P0DP24 149 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 CALM3P0DP25 149 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 EIF2AK2P19525 551 aaKnown RBP12.62□□□□□ -0.39
PVT1-216ENST00000523068 SMARCA1P28370 1054 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 GNAQP50148 359 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 PSMC6P62333 389 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 Q7L0L9 218 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 ZNF654Q8IZM8 581 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 LZTS2Q9BRK4 669 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 PPP1R12CQ9BZL4 782 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
PVT1-216ENST00000523068 HIPK3Q9H422 1215 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 LY9Q9HBG7 655 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 MTMR10Q9NXD2 777 aa12.62□□□□□ -0.39
PVT1-216ENST00000523068 GCOM1H8Y6P7 765 aaPredicted RBP12.61□□□□□ -0.39
PVT1-216ENST00000523068 OPLAHO14841 1288 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 CYTH3O43739 400 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 B4GALT4O60513 344 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 ARIH2O95376 493 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 POLR2MP0CAP2 368 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 LIFRP42702 1097 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 EPHB4P54760 987 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
PVT1-216ENST00000523068 NFRKBQ6P4R8 1299 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 CCDC62Q6P9F0 684 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 PSRC1Q6PGN9 363 aaPredicted RBP12.61□□□□□ -0.39
PVT1-216ENST00000523068 KCNV1Q6PIU1 500 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 COPS5Q92905 334 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 RRP36Q96EU6 259 aaKnown RBP12.61□□□□□ -0.39
PVT1-216ENST00000523068 SEC63Q9UGP8 760 aaKnown RBP12.61□□□□□ -0.39
PVT1-216ENST00000523068 MRVI1Q9Y6F6 885 aa12.61□□□□□ -0.39
PVT1-216ENST00000523068 SH2B2O14492 632 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms