RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 RBM5P52756 815 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDR1-271ENST00000513240 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
DDR1-271ENST00000513240 CERS5Q8N5B7 392 aa16.34■□□□□ 0.21
DDR1-271ENST00000513240 RRP36Q96EU6 259 aaKnown RBP16.34■□□□□ 0.21
DDR1-271ENST00000513240 SLC24A3Q9HC58 644 aa16.34■□□□□ 0.21
DDR1-271ENST00000513240 TCP11L1Q9NUJ3 509 aa16.34■□□□□ 0.21
DDR1-271ENST00000513240 REXO2Q9Y3B8 237 aaKnown RBP16.34■□□□□ 0.21
DDR1-271ENST00000513240 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.21
DDR1-271ENST00000513240 BMP15O95972 392 aa16.33■□□□□ 0.21
DDR1-271ENST00000513240 DNAAF5Q86Y56 855 aa16.33■□□□□ 0.21
DDR1-271ENST00000513240 NOA1Q8NC60 698 aaKnown RBP16.33■□□□□ 0.21
DDR1-271ENST00000513240 PANX2Q96RD6 677 aa16.33■□□□□ 0.21
DDR1-271ENST00000513240 ANKZF1Q9H8Y5 726 aa16.33■□□□□ 0.21
DDR1-271ENST00000513240 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.21
DDR1-271ENST00000513240 SCAF8Q9UPN6 1271 aaKnown RBP16.33■□□□□ 0.21
DDR1-271ENST00000513240 USP17L15C9J2P7 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L13C9JLJ4 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L11C9JVI0 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L18D6R9N7 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L22D6RA61 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L17D6RBQ6 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L19D6RCP7 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L20D6RJB6 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 G3V3G9 751 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 IRF6O14896 467 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 ZNF185O15231 689 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 OR52Z1P0C646 297 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 TRIM21P19474 475 aaKnown RBP16.33■□□□□ 0.2
DDR1-271ENST00000513240 TBC1D8BQ0IIM8 1120 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L24Q0WX57 530 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 NONOQ15233 471 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDR1-271ENST00000513240 DCAF8Q5TAQ9 597 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 DUSP9Q99956 384 aaKnown RBP16.33■□□□□ 0.2
DDR1-271ENST00000513240 BCAS3Q9H6U6 928 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 LEMD3Q9Y2U8 911 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 DAGLAQ9Y4D2 1042 aa16.33■□□□□ 0.2
DDR1-271ENST00000513240 EPHB6O15197 1021 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 CHMP4BP1P59074 171 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 PPARDQ03181 441 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 ECM1Q16610 540 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 PTPROQ16827 1216 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 FAM43BQ6ZT52 329 aaPredicted RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 KIAA0825Q8IV33 1275 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 MB21D1Q8N884 522 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 TUBGCP2Q9BSJ2 902 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 MMTAG2Q9BU76 263 aaKnown RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 CCT5P48643 541 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 CTAGE1Q96RT6 745 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 MAGEC2Q9UBF1 373 aaPredicted RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 LIMA1Q9UHB6 759 aaKnown RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 GBP6Q6ZN66 633 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 ZSCAN29Q8IWY8 852 aaPredicted RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 GSPT2Q8IYD1 628 aaKnown RBP16.32■□□□□ 0.2
DDR1-271ENST00000513240 GIMAP7Q8NHV1 300 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 CRACR2AQ9BSW2 395 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 FGFBP2Q9BYJ0 223 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
DDR1-271ENST00000513240 PLCH1Q4KWH8 1693 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 LDHCP07864 332 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 STAT3P40763 770 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 ARHGAP25P42331 645 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 GSTO1P78417 241 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 BIRC2Q13490 618 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 CASP8Q14790 479 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 CNGA4Q8IV77 575 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
DDR1-271ENST00000513240 TRIM9Q9C026 710 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 LUC7L2Q9Y383 392 aaKnown RBP16.31■□□□□ 0.2
DDR1-271ENST00000513240 EPN1Q9Y6I3 576 aaPredicted RBP16.31■□□□□ 0.2
DDR1-271ENST00000513240 MYMKA6NI61 221 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 RASSF10A6NK89 507 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 EDIL3O43854 480 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
DDR1-271ENST00000513240 PDHBP11177 359 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
DDR1-271ENST00000513240 MATR3P43243 847 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDR1-271ENST00000513240 TRAPPC10P48553 1259 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 ARID5AQ03989 594 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 MAP9Q49MG5 647 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 CNOT6LQ96LI5 555 aaKnown RBP16.31■□□□□ 0.2
DDR1-271ENST00000513240 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 LRWD1Q9UFC0 647 aa16.31■□□□□ 0.2
DDR1-271ENST00000513240 PSMA7O14818 248 aa16.3■□□□□ 0.2
DDR1-271ENST00000513240 WDR59Q6PJI9 974 aa16.3■□□□□ 0.2
DDR1-271ENST00000513240 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
DDR1-271ENST00000513240 KIAA0895Q8NCT3 520 aa16.3■□□□□ 0.2
DDR1-271ENST00000513240 FAM71BQ8TC56 605 aa16.3■□□□□ 0.2
DDR1-271ENST00000513240 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
DDR1-271ENST00000513240 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms